EUNIS habitat maps: enhancing thematic and spatial resolution for Europe through machine learning
Sara Si-Moussi1, Stephan Hennekens2, Sander Mücher2
1Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France. sara.si-moussi@univ-grenoble-alpes.fr.
Scientific Data
|December 11, 2025
Summary
We mapped 260 European habitats using machine learning and satellite data to support nature conservation and the Nature Restoration Law. This detailed habitat map provides crucial information for ecological restoration efforts across Europe.
Area of Science:
- Ecology
- Environmental Science
- Geospatial Analysis
Background:
- The EUNIS habitat classification is vital for European nature conservation policies, including the Nature Restoration Law.
- Accurate and detailed habitat data is increasingly needed for effective conservation and restoration planning.
- Existing habitat maps may lack the resolution or detail required for current policy needs.
Purpose of the Study:
- To generate high-resolution spatial predictions for 260 EUNIS habitat types across the EEA39 territory.
- To provide independent validation and uncertainty analyses for the generated habitat maps.
- To create a valuable resource for European conservation and restoration initiatives.
Main Methods:
- Utilized ensemble machine learning models trained on high-resolution satellite imagery.
- Incorporated ecologically relevant climatic, topographic, and edaphic variables.
- Performed spatial block cross-validation and external validation using independent datasets.
Main Results:
- Produced a 100-m resolution European habitat map identifying the most probable habitat type.
- Quantified prediction uncertainty and identified probable habitats within EUNIS level 1 formations.
- Achieved strong predictive performance, with F1-scores up to 0.95 in external validation.
- Demonstrated improved accuracy for rare or localized habitats when considering top predictions.
Conclusions:
- The developed European habitat map offers unprecedented detail and accuracy for conservation and restoration.
- The spatial predictions and uncertainty analyses are crucial tools for implementing European environmental policies.
- This resource supports evidence-based decision-making for biodiversity protection and habitat management.
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