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Updated: May 19, 2026

Soil Lysimeter Excavation for Coupled Hydrological, Geochemical, and Microbiological Investigations
Published on: September 11, 2016
Integrating Compositional Data Analysis (CoDA) and Random Forest for lithology-specific geochemical baseline
Federica Meloni1, Caterina Gozzi2, Jacopo Cabassi3
1Department of Earth Sciences, Via G. La Pira, 4, 50121, Firenze, Italy; CNR-IGG, Via G. La Pira, 4, 50121,, Firenze, Italy.
This study introduces a new method combining data analysis and machine learning to determine accurate geochemical baselines in complex mining areas. This helps differentiate natural soil conditions from pollution, crucial for environmental management.
Area of Science:
- Environmental Geochemistry
- Applied Geology
- Data Science in Earth Sciences
Background:
- Accurate geochemical baselines are vital for distinguishing natural soil composition from anthropogenic contamination in mining-affected regions.
- Geologically complex areas with historical mining pose challenges for establishing reliable background values.
- Existing methods may be insufficient in areas with long-term industrial impact and diverse geological formations.
Purpose of the Study:
- To develop and validate an improved methodology for defining lithology-specific geochemical baselines.
- To accurately distinguish natural geochemical variations from legacy contamination in soils.
- To support regulatory decisions and remediation strategies in complex geological settings.
Main Methods:
- Integration of Compositional Data Analysis (CoDa) with the Random Forest algorithm for robust lithological classification.
- Analysis of over 300 topsoil and subsoil samples for mineralogy and trace elements (Hg, As, Sb, Cr, Cu, Co, V, Ni).
- Application of robust statistical methods (median ± 2MAD) for baseline value computation.
Main Results:
- Successfully estimated geochemical baselines for Hg, As, and Sb, demonstrating strong lithological control across volcanic and sedimentary domains.
- Identified significant variability in baseline values linked to geological settings, aiding in distinguishing natural anomalies from contamination.
- Observed baseline values exceeding Italian legal thresholds for Hg and As, highlighting the need for site-specific regulations.
Conclusions:
- The proposed workflow effectively establishes lithology-specific geochemical baselines in complex, historically mined areas.
- The methodology provides crucial insights into the natural variability and resilience of different geological domains.
- Findings underscore the necessity of tailored regulatory limits and the potential for broader application in similar contaminated regions.
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