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Longitudinal human transcriptomic and spatial gene profiling at the incisional edge during long surgical procedures
Matthew R Sapio1, Evelyn Li1, Anthony F Domenichiello2,3
1Department of Perioperative Medicine, National Institutes of Health, Clinical Center, Bethesda, MD, USA.
Communications Biology
|December 22, 2025
Summary
This study reveals early molecular changes in skin after surgery, identifying key signaling molecules and their receptors involved in post-surgical pain. Understanding these mechanisms offers new insights into pain development and potential therapeutic targets.
Area of Science:
- Molecular Biology
- Neuroscience
- Dermatology
Background:
- Post-surgical pain significantly impacts patient quality of life.
- The initial molecular events driving nociceptive sensitization after surgery are not fully understood.
Purpose of the Study:
- To investigate the early molecular changes at the surgical wound edge.
- To identify key genes and signaling pathways involved in post-surgical pain development.
Main Methods:
- Longitudinal sampling of surgical wound edges.
- RNA-Sequencing (RNA-Seq) to analyze gene expression.
- Multiplex fluorescence in situ hybridization for spatial gene localization.
Main Results:
- Identified significant gene induction, including interleukin-6, oncostatin M, and leukemia inhibitory factor.
- Localized these induced factors to cutaneous structures like epidermis, hair follicles, and sweat glands.
- Demonstrated expression of factor receptors on dorsal root ganglion neurons, indicating a signaling pathway to the spinal cord.
Conclusions:
- Elucidated the inflammatory and tissue repair transcriptional landscape in human skin post-surgery.
- Provided novel insights into the molecular interactome activated by tissue injury.
- Established a link between skin injury, molecular signaling, and the initiation of post-surgical pain.

