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Published on: October 28, 2019
Viral SAM-binding proteins nsp14 and NP868R reprogram ATG4A-dependent autophagy from antiviral LC3B activity to
Yahui Li1,2, Ya Zhu1, Fei Wang1
1MOA Key Laboratory of Animal Virology, Zhejiang University Center for Veterinary Sciences, Zhejiang University, Hangzhou, China.
Abstract:
Members of the mammalian Atg8-protein family (ATG8), including the MAP1LC3/LC3 and GABARAP subfamilies, play essential roles in selective macroautophagy/autophagy. However, their functional distinctions during viral infection remain poorly understood. Here, we show that S-adenosyl-L-methionine (SAM)-binding viral proteins, such as nsp14 from coronavirus and NP868R from African swine fever virus (ASFV), reprogram autophagy by shifting antiviral LC3B activity toward GABARAP-mediated mitophagy in an ATG4A-dependent manner. Mechanistically, the SAM-binding motif allows these viral proteins to stabilize ATG4A mRNA, thereby increasing ATG4A expression and redirecting autophagic flux from LC3B-mediated virophagy to GABARAP-dependent mitophagy. This shift suppresses innate immune responses by targeting both MAVS-dependent interferon signaling and virophagy, ultimately enhancing viral replication. Collectively, our findings uncover a previously unrecognized immune evasion strategy in which SAM-binding viral proteins rewire autophagy from antiviral to proviral pathways.Abbreviation: ACTB: actin beta; ATG: autophagy related genes; ASFV: African swine fever virus; CALCOCO2/NDP52: calcium binding and coiled-coil domain 2; CQ: chloroquine; CS: citrate synthase; ExoN: exoribonuclease; GABARAP: GABA type A receptor-associated protein; IFN: type I interferon; IFNB: interferon beta; IPEC-J2: intestinal porcine epithelial cell line-J2; MAP1LC3/LC3: microtubule associated protein 1 light chain 3; MAVS: mitochondrial antiviral signaling protein; MT-CO2/COX2: mitochondrially encoded cytochrome c oxidase II; nsp14: nonstructural protein 14; OPTN: optineurin; PEDV: porcine epidemic diarrhea virus; RNMT/N7-MTases: RNA guanine-7 methyltransferase; SAM: S-adenosyl-L-methionine; SQSTM1/p62: sequestosome 1; TAX1BP1: Tax1 binding protein 1; TCID50: 50% tissue culture infective dose; TOMM70: translocase of outer mitochondrial membrane 70; TOMM20: translocase of outer mitochondrial membrane 20; WT: wild-type.
Insights
Viral proteins reprogram autophagy by stabilizing ATG4A mRNA, shifting activity from LC3B to GABARAP-mediated mitophagy. This immune evasion strategy enhances viral replication by suppressing innate immunity and virophagy.
Area of Science:
- Cellular Biology
- Virology
- Immunology
Background:
- The mammalian Atg8-protein family (ATG8) is crucial for selective macroautophagy/autophagy.
- Functional distinctions of ATG8 proteins during viral infections are not well understood.
Purpose of the Study:
- To investigate how S-adenosyl-L-methionine (SAM)-binding viral proteins influence autophagy during infection.
- To elucidate the mechanisms by which viral proteins reprogram autophagy and evade host immunity.
Main Methods:
- Analysis of SAM-binding viral proteins (nsp14, NP868R) and their interaction with ATG8 proteins.
- Investigation of ATG4A mRNA stabilization and its effect on autophagic flux.
- Assessment of innate immune responses, including interferon signaling and virophagy.
- Evaluation of viral replication rates.
Main Results:
- SAM-binding viral proteins stabilize ATG4A mRNA, increasing ATG4A expression.
- Autophagic flux is redirected from LC3B-mediated virophagy to GABARAP-dependent mitophagy.
- This shift suppresses MAVS-dependent interferon signaling and virophagy.
- Viral replication is enhanced due to suppressed innate immune responses.
Conclusions:
- Viral proteins employ a novel immune evasion strategy by hijacking autophagy.
- SAM-binding viral proteins rewire autophagy from antiviral to proviral pathways.
- Targeting ATG4A offers a potential avenue for antiviral therapies.
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