Implementing Publicly Funded Fetal Exome Sequencing: A Statewide Multidisciplinary Model for Equitable Integration of
Willem Gheysen1,2, Calder Hamill3, Susan Fawcett4
1Department of Perinatal Medicine, Mercy Hospital for Women, Heidelberg, Australia.
Prenatal Diagnosis
|December 25, 2025
Summary
A statewide perinatal exome sequencing program in Australia demonstrated feasibility and clinical utility. The program showed equitable access across diverse populations, supporting structured implementation for genomic care.
Area of Science:
- Genomic Medicine
- Reproductive Health
- Public Health Policy
Background:
- Perinatal exome sequencing (ES) offers diagnostic potential for fetal anomalies.
- Implementing large-scale genomic programs requires evaluation of access and outcomes.
Purpose of the Study:
- To assess the implementation of a publicly funded statewide perinatal exome sequencing program in Victoria, Australia.
- Key evaluation areas included eligibility, diagnostic yield, clinical utility, and equity.
Main Methods:
- Retrospective cohort study of exome sequencing referrals for fetal anomalies (2018-2022).
- Multidisciplinary teams assessed eligibility; data analyzed for approval rates, diagnostic yield, timing, and outcomes.
- Subgroup analyses compared prenatal and postmortem cases.
Main Results:
- 93% of referrals were approved for publicly funded exome sequencing.
- Diagnostic yield was 38%, consistent across prenatal and postmortem cases.
- Causative variants significantly increased termination rates in prenatal cases; equitable access observed across socioeconomic and migrant groups.
Conclusions:
- State-funded, multidisciplinary team-led perinatal exome sequencing is feasible and clinically useful.
- The program demonstrated equitable access, validating structured implementation.
- Ongoing evaluation is crucial for equitable genomic care delivery.
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