Lexicon for Clonal Hematopoiesis in Liquid Biopsy

Robert Tell1, Ahmet Zehir2, Andrew T Anfora3

  • 1Tempus AI, Inc., Chicago, Illinois, USA.

PubMed

Insights

Clonal hematopoiesis (CH) complicates cell-free DNA (cfDNA) testing but offers diagnostic potential. The BLOODPAC Consortium created a lexicon to standardize terms for CH/CHIP, improving liquid biopsy interpretation and data collection.

Area of Science:

  • Genomics
  • Biomarkers
  • Oncology

Background:

  • Clonal hematopoiesis (CH) historically confounded cell-free DNA (cfDNA) testing.
  • Emerging evidence highlights CH as a health risk factor and a source for liquid biopsy diagnostics.
  • Standardization gaps hinder the clinical translation of CH-based liquid biopsy assays.

Purpose of the Study:

  • To address the need for accurate identification and removal of CH from liquid biopsy results.
  • To develop a standardized lexicon for CH/CHIP and liquid biopsy terminology.
  • To facilitate communication and unify data collection across stakeholders in the field.

Main Methods:

  • Establishment of the CH/clonal hematopoiesis of indeterminate potential (CHIP) Working Group by the BLOODPAC Consortium.
  • Development of a unified vocabulary for CH, CHIP, liquid biopsy, DNA sequencing, biomarkers, and clinical applications.
  • Focus on standardizing terms to improve interpretability of CH/CHIP results.

Main Results:

  • A lexicon has been developed to standardize terminology related to CH/CHIP.
  • The lexicon aims to unify vocabulary for liquid biopsy, DNA sequencing, biomarkers, and clinical use cases.
  • This initiative supports the accurate identification and interpretation of CH/CHIP in liquid biopsies.

Conclusions:

  • Standardized terminology is crucial for advancing CH/CHIP diagnostics in liquid biopsies.
  • Agreement on terminology will improve communication among researchers, clinicians, and regulatory bodies.
  • The developed lexicon facilitates consistent data collection and enhances the clinical utility of liquid biopsy assays.