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Related Concept Videos

lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

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In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
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lncRNA - Long Non-coding RNAs02:39

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Ribosome Profiling02:24

Ribosome Profiling

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Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
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Non-LTR Retrotransposons03:18

Non-LTR Retrotransposons

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As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
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Related Experiment Video

Updated: Jan 7, 2026

RNA Pull-down Procedure to Identify RNA Targets of a Long Non-coding RNA
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RNA Pull-down Procedure to Identify RNA Targets of a Long Non-coding RNA

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TUG1: a potential endogenous reference gene for long noncoding RNA quantification in blood-based studies.

Carlos Rodríguez-Muñoz1,2, Anna Vila1, Sally Santisteve1,2

  • 1Translational Research in Respiratory Medicine, University Hospital Arnau de Vilanova and Santa Maria, IRBLleida, Avda, Alcalde Rovira Roure 80, Lleida, 25198, Spain.

Biomarker Research
|December 30, 2025
PubMed
Summary

Identifying stable long noncoding RNA (lncRNA) controls is crucial for accurate gene expression analysis. This study found TUG1 to be the most stable lncRNA for normalizing quantitative PCR data in whole-blood samples.

Area of Science:

  • Molecular Biology
  • Genomics
  • Biomarker Discovery

Background:

  • Accurate quantification of long noncoding RNAs (lncRNAs) is essential for their use as biomarkers.
Keywords:
Endogenous controlLong noncoding RNAsNormalizationPeripheral bloodQuantitative real-time polymerase chain reactionReference genesStabilityTUG1Whole blood

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  • Quantitative PCR (qPCR) requires stable endogenous controls for reliable gene expression normalization.
  • Identifying suitable reference genes in whole-blood samples is challenging.