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A novel strategy for detecting multiple mediators in high-dimensional mediation models.

Pei-Shan Yen1, Zhaoliang Zhou1, Soumya Sahu1

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Frontiers in Psychiatry
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Summary

This study introduces a new method using modified LASSO and Pathway LASSO to accurately detect multiple biomarkers in complex mediation models. It improves true positive rates for identifying mediators and enhances biomarker discovery in clinical research.

Keywords:
LASSOPathway LASSObiomarker detectionchoice of penaltymediation analysisoverestimation

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Area of Science:

  • Biostatistics
  • Genomics
  • Computational Biology

Background:

  • High-dimensional mediation models often suffer from overestimated direct effects, leading to inaccurate identification of true mediators.
  • Existing methods struggle with identifying multiple biomarkers simultaneously in complex biological systems.

Purpose of the Study:

  • To develop a novel methodology for accurate detection of multiple biomarkers in high-dimensional mediation models.
  • To address the overestimation of direct effects and improve the identification of mediators with significant indirect effects.

Main Methods:

  • Utilized a modified Least Absolute Shrinkage and Selection Operator (LASSO) combined with Pathway LASSO.
  • Introduced two constraints on the L1-norm penalty to mitigate direct effect overestimation.
  • Incorporated sure independence screening for optimal dimension reduction threshold selection.

Main Results:

  • The proposed methodology demonstrated superior performance in simulations across various scenarios compared to existing methods.
  • Achieved improved true positive rates for mediator detection and enhanced accuracy in identifying true biomarkers.
  • The method proved robust and reliable, suitable for real-world applications.

Conclusions:

  • This novel approach offers a substantial advancement in biomarker detection for high-dimensional mediation analysis.
  • The methodology enhances the accuracy and robustness of mediator identification, with significant implications for clinical research and practice.
  • Demonstrated practical utility through application to datasets on internalizing psychopathology and late-life depression.