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Proteomics

Proteomics

A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...

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Related Experiment Video

Updated: Jan 7, 2026

Comprehensive Workflow of Mass Spectrometry-based Shotgun Proteomics of Tissue Samples

Comprehensive Workflow of Mass Spectrometry-based Shotgun Proteomics of Tissue Samples

Published on: November 13, 2021

Frag'n'Flow: automated workflow for large-scale quantitative proteomics in high performance computing environments

Istvan Szepesi-Nagy^1,2, Roberta Borosta^1,3, Zoltan Szabo⁴

¹MTA-HUN-REN RCNS Lendulet "Momentum" DNA Repair Research Group, Institute of Molecular Life Sciences, HUN-REN Research Centre for Natural Sciences, Magyar Tudosok Korutja 2, Budapest, 1117, Hungary.

BMC Bioinformatics

|January 4, 2026

Summary

No abstract available in PubMed .

Keywords:

FragPipe HPC Mass spectrometry Nextflow Quantitative proteomics

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