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Updated: Jan 13, 2026

Preparation and Observation of Thick Biological Samples by Scanning Transmission Electron Tomography
Published on: March 12, 2017
Large volume 'chunk' lift out for 3D tomographic analysis using analytical plasma focussed ion beam - scanning
Ruth Birch1, Shuheng Li1, Sharang Sharang2
1Department of Materials Engineering, UBC, Vancouver, Canada.
None:
Characterization of the structure and properties of materials in three dimensions, including grains and the residual pattern of deformation, provides necessary information required to guide materials design as well as support materials modelling efforts. In this work, we present an overview of site-specific large volume 'chunk' lift out and 3D serial sectioning of substantive volumes (e.g. 200 ×200 x 400 μm3), where sectioning is optimized for 3D electron backscatter diffraction (EBSD) based crystallographic analysis, using a plasma (Xe) focussed ion beam scanning electron microscope (plasma FIB-SEM) equipped to perform EBSD using a 'static' configuration (i.e. slicing and EBSD-mapping are performed without moving the sample). This workflow is demonstrated through the 3D plasma FIB-SEM based EBSD analysis of an indent made within a polycrystal of pure magnesium. The lift out approach is suitable for a wide range of materials, and we offer a step-by-step guide within the present work to provide opportunity for others to more easily enter this field and collect valuable data.
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