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Updated: Jan 13, 2026

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Proofreading and DNA Repair Assay Using Single Nucleotide Extension and MALDI-TOF Mass Spectrometry Analysis
Published on: June 19, 2018
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DNA polymerase I is an efficient reverse transcriptase that mediates RNA-templated DNA repair synthesis
Frances C Lowder1, Abigail H Kendal1, Lyle A Simmons1
1Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI 48109.
Biorxiv : the Preprint Server for Biology
|January 9, 2026
Summary
Bacterial DNA polymerase I (Pol I) acts as a reverse transcriptase, synthesizing DNA from RNA templates. This polymerase efficiently bypasses RNA within DNA, unlike other replicative polymerases.
Area of Science:
- Molecular Biology
- Genomics
- Biochemistry
Background:
- Ribonucleotides are frequently incorporated into genomic DNA during normal growth and stress.
- The specific DNA polymerase responsible for RNA-templated DNA synthesis remains unidentified.
Purpose of the Study:
- To identify the bacterial DNA polymerase catalyzing RNA-dependent DNA synthesis.
- To characterize the reverse transcriptase activity of bacterial DNA polymerase I (Pol I).
Main Methods:
- Testing various bacterial Pol I enzymes for reverse transcriptase (RT) activity.
- Comparing the RNA-dependent DNA synthesis activity of *B. subtilis* Pol I with a known reverse transcriptase.
- Assessing the ability of Pol I and replicative DNA polymerase PolC to navigate RNA embedded within DNA templates.
Main Results:
- All tested bacterial Pol I enzymes exhibited reverse transcriptase activity.
- *B. subtilis* Pol I demonstrated RNA-dependent DNA synthesis comparable to Moloney Murine Leukemia Virus reverse transcriptase.
- Pol I efficiently processed long stretches of templated ribonucleotides, whereas PolC arrested at single ribonucleotides.
Conclusions:
- Bacterial DNA polymerase I is a robust reverse transcriptase.
- Pol I facilitates RNA-templated DNA replication, enabling replication forks to overcome persistent RNA in genomic DNA.
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