Related Experiment Video
Updated: Jan 13, 2026

Mapping Bacterial Functional Networks and Pathways in Escherichia Coli using Synthetic Genetic Arrays
Published on: November 12, 2012
Nirmala indices bridge molecular connectivity and genetic stability: A graph-theoretic lens on purines and
1Department of Mathematics Government First Grade College, K. R. Puram, Bangalore, 560036, Karnataka, India; Department of Mathematics, New Horizon College of Engineering, Bengaluru, 560103, Karnataka, India.
Abstract:
Molecular topology lies at the heart of biological complexity and degree-based topological indices serve as fundamental invariants for quantifying the structural and functional organization of biomolecular systems. In this work we present a unified graph-theoretic framework for analyzing the molecular graphs of purines and pyrimidines using the Nirmala index N(G) and its two inverse variants IN1(G) and IN2(G). Here G=(V,E) denotes the molecular graph of a purine or pyrimidine molecule, where vertices V represent heavy atoms (C, N, O) and edges E correspond to covalent bonds with hydrogens omitted in accordance with standard chemical graph theory conventions. The five canonical nucleobases-Adenine and Guanine (purines) and Cytosine, Thymine and Uracil (pyrimidines)-are modeled to enable systematic comparison between these two molecular classes. Rigorous degree-based theorems are established to derive extremal bounds for the indices in terms of the minimum and maximum vertex degrees, δ(G) and Δ(G) and to demonstrate analytical duality between IN1(G) and IN2(G). Explicit computations reveal that purines exhibit greater degree heterogeneity and larger N(G) values whereas pyrimidines display higher regularity with IN1(G) and IN2(G) approaching their theoretical upper bounds. Biologically this degree-sensitive quantification captures structural asymmetry, bonding regularity and intrinsic stability across purine and pyrimidine frameworks. The proposed Nirmala-type indices thus establish a concise mathematical-biological bridge linking molecular topology to functional stability in genetic architectures offering promising applications in cheminformatics, QSAR/QSPR modeling and systems-level analysis of nucleic acids.
More Related Videos
05:32Author Spotlight: Characterizing DNA G-Quadruplex by Bis-3-Chloropiperidine Based Chemical Mapping
Published on: May 12, 2023
07:08Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues
Published on: July 14, 2015
Related Concept Videos
Biosynthesis of Nucleic Acids
Nucleic Acid Structure
DNA Structure
DNA...
Basicity of Heterocyclic Aromatic Amines
DNA Base Pairing
Covalently Linked Protein Regulators
These groups modify specific amino acids in a protein....
Base-pairing and DNA Repair