Quantifying central canal stenosis prediction uncertainty in SpineNet with conformal prediction
Andrea Cina1,2,3, Maria Monzon4,5, Fabio Galbusera6
1Department of Health Sciences and Technology (D-HEST), ETH Zurich, Universitätstrasse 2, Zürich, 8092, Switzerland. andrea.cina@hest.ethz.ch.
Scientific Reports
|January 10, 2026
Summary
Conformal prediction (CP) quantifies uncertainty in spinal canal stenosis (CCS) grading using SpineNet. Class-conditional CP offers reliable, informative uncertainty estimates for medical decision-making.
Area of Science:
- Medical Imaging
- Machine Learning
- Radiology
Background:
- Central canal stenosis (CCS) grading from MRI is crucial for patient management.
- Accurate prediction of CCS severity is essential for clinical decision-making.
- Quantifying uncertainty in AI model predictions is vital for clinical adoption.
Purpose of the Study:
- To apply conformal prediction (CP) methods to SpineNet for quantifying uncertainty in CCS classification.
- To evaluate the performance of different CP techniques in grading CCS severity.
- To identify the most reliable CP method for clinical application in CCS assessment.
Main Methods:
- Analysis of 1689 vertebral levels from 340 patients undergoing T2-weighted MRI.
- Application and evaluation of four conformal prediction methods: class-conditional CP, Top-k, Least Ambiguous Set-Valued Classifiers (LAC), and Adaptive Prediction Sets (APS).
- Bootstrap resampling used for robustness assessment across calibration/test splits; multiple significance levels (α) evaluated.
Main Results:
- Class-conditional CP consistently achieved desired coverage with the smallest prediction sets.
- Top-k, LAC, and APS methods showed limitations, producing larger or less informative prediction sets, especially for moderate/severe CCS.
- Class-conditional CP demonstrated class- and level-specific uncertainty, with larger sets for moderate/severe grades, indicating higher uncertainty.
Conclusions:
- Class-conditional CP is the most reliable and clinically informative method for estimating uncertainty in CCS grading.
- CP provides a transparent approach to assess SpineNet's reliability in medical predictions.
- This approach enhances decision-making by providing quantified uncertainty alongside CCS severity classification.


