Related Experiment Video
Updated: Jan 24, 2026

11:36
Assembly, Loading, and Alignment of an Analytical Ultracentrifuge Sample Cell
Published on: November 5, 2009
23.2K
High-Resolution Characterization of Protein-Conjugated, mRNA-Loaded Lipid Nanoparticles by Analytical
Sophia Bird1, Connor Smith2, Nahal Habibi2
1Department of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, AB T1K4M3, Canada.
Summary
The Custom Grid algorithm accurately quantifies lipid nanoparticle (LNP) composition and cargo loading using density matching. This method reliably distinguishes empty LNPs from mRNA-loaded ones, crucial for LNP formulation quality control.
Area of Science:
- Biophysical Chemistry
- Nanotechnology
- Pharmaceutical Sciences
Background:
- Lipid nanoparticles (LNPs) are key delivery vehicles for therapeutics like mRNA.
- Accurate characterization of LNP composition, especially cargo loading, is critical for efficacy and safety.
- Existing methods struggle to reliably quantify empty versus loaded LNPs.
Purpose of the Study:
- To introduce and validate a novel application of the Custom Grid (CG) algorithm for analyzing LNPs.
- To demonstrate the CG algorithm's capability in determining LNP properties like density, molar mass, and size distributions.
- To establish a reliable method for distinguishing empty LNPs from those loaded with cargo, such as mRNA or proteins.
Main Methods:
- Utilized sedimentation velocity analytical ultracentrifugation (SV-AUC) experiments.
- Employed density matching with D2O and the Custom Grid (CG) algorithm for data analysis.
- Applied parametrically constrained spectrum analysis for orthogonal validation.
Main Results:
- The CG algorithm successfully derived partial specific volume, molar mass, and hydrodynamic radius distributions for various LNPs.
- Density profiles generated by the CG method confirmed successful cargo loading and distinguished between empty and mRNA-loaded LNPs.
- Orthogonal validation using parametrically constrained spectrum analysis showed good agreement with CG results.
Conclusions:
- The CG algorithm, combined with density matching, provides a robust method for characterizing LNP composition and cargo loading.
- This approach overcomes limitations of polydispersity assessment for determining empty LNP fractions.
- The method offers a reliable tool for quality control in LNP formulation development.
Keywords:
UltraScananalytical ultracentrifugationcustom gridlipid nanoparticle analysissedimentation velocityMore Related Videos
Related Concept Videos
Conjugated Proteins
27.5K
Simple proteins and protein complexes contain only amino acids. In contrast, many other proteins, called conjugated proteins, covalently bond with non-protein moieties.
Nucleoproteins are protein complexes that contain nucleic acids, categorized as deoxyribonucleoproteins (DNPs) or ribonucleoproteins (RNPs) respectively. The nucleosome is a typical example of a DNP where nuclear DNA is associated with histone proteins. The major antigen for the Covid-19 virus SARS-CoV is an RNP that is critical...
Nucleoproteins are protein complexes that contain nucleic acids, categorized as deoxyribonucleoproteins (DNPs) or ribonucleoproteins (RNPs) respectively. The nucleosome is a typical example of a DNP where nuclear DNA is associated with histone proteins. The major antigen for the Covid-19 virus SARS-CoV is an RNP that is critical...
27.5K
Conjugated Proteins
3.2K
3.2K
Regulated mRNA Transport
7.0K
In eukaryotes, transcription and translation are compartmentalized; an mRNA is first synthesized in the nucleus and then selectively transported to the cytoplasm for protein synthesis. Before transport, a pre-mRNA undergoes several steps of post-transcriptional modifications including splicing, 5' capping, and the addition of a poly-adenine tail. Various proteins bind to the pre-mRNA during these modifications. The mRNA transport takes place with the help of multiple proteins playing...
7.0K
Nuclear Export of mRNA
8.7K
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
8.7K
pre-mRNA Processing
57.2K
In eukaryotic cells, transcripts made by RNA polymerase are modified and processed before exiting the nucleus. Unprocessed RNA is called precursor mRNA or pre-mRNA to distinguish it from mature mRNA.
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a “cap” to the 5’ end of the growing transcript. In this process, a 5’ phosphate is replaced by modified guanosine that has a methyl group attached to it (7-Methyl...
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a “cap” to the 5’ end of the growing transcript. In this process, a 5’ phosphate is replaced by modified guanosine that has a methyl group attached to it (7-Methyl...
57.2K
mRNA Stability and Gene Expression
6.6K
The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
Cis-acting Elements involved in mRNA stability
6.6K

