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Development of Multiple Local Computational Models in Retrosynthetic Analysis: Total Synthesis of (-)-Deoxylimonin
Leanna M Gharbaoui1, Jungmin Eun1, Yizhou Zhao1
1Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520-8107, United States.
Journal of the American Chemical Society
|January 26, 2026
Summary
Researchers developed a novel de novo strategy for synthesizing seco-limonoids, exemplified by deoxylimonin. This approach efficiently constructs a key carbocyclic tricycle using robust chemistry and computational modeling.
Area of Science:
- Organic Chemistry
- Synthetic Chemistry
- Computational Chemistry
Background:
- Limonoids are a diverse class of natural products with significant biological activities.
- The A,D-seco limonoid subclass presents unique synthetic challenges due to its fragmented ring structure.
Purpose of the Study:
- To establish a de novo synthetic strategy for accessing A,D-seco limonoids.
- To synthesize deoxylimonin, a characteristic member of this subclass.
- To integrate computational modeling into retrosynthetic analysis for efficient route design.
Main Methods:
- Development of a robust synthetic route featuring resilient chemistry.
- Construction of a key carbocyclic tricycle intermediate in eight steps.
- Application of a modern oxy-Michael reaction for ring cleavage and formation.
- Utilization of two local computational models to guide retrosynthetic analysis.
Main Results:
- Successful synthesis of deoxylimonin via the developed de novo strategy.
- Efficient assembly of the core carbocyclic tricycle.
- Demonstration of computational models augmenting transform-based and structure-goal-based retrosynthetic approaches.
Conclusions:
- The developed strategy provides a viable route to A,D-seco limonoids.
- The integration of computational modeling enhances synthetic planning and efficiency.
- This work expands the synthetic accessibility of complex natural product scaffolds.
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