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Dechorionation of Medaka Embryos and Cell Transplantation for the Generation of Chimeras
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AmpliFuse: an amplicon simulation tool with enhanced chimera generation for Illumina platforms
1Ottawa Laboratory-Fallowfield, Canadian Food Inspection Agency, Nepean, Ontario, Canada.
None:
PCR-generated chimeric amplicons undermine the accuracy and reliability of subsequent amplicon-sequencing analyses. AmpliFuse, a Python-based tool, simulates realistic amplicon datasets through in silico PCR, chimera formation, and read simulation. By providing biologically relevant chimera-containing amplicon reads, AmpliFuse would facilitate benchmarking of chimera-detection algorithms and workflows, advancing microbiome and AMR research.
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