Related Experiment Video
Updated: Jan 31, 2026

Comparative Proteomic Analysis of Whole Kidney, Medulla, and Cortical Tubules in Diabetic Pathogenesis of Kidney Injury in Mice
Published on: May 2, 2025
Comparative proteomic analysis of the zebrafish (Danio rerio) perivitelline fluid; identifying putative cortical
B A Lewis1, K L Reader2, M W Pankhurst3
1Department of Zoology, Division of Sciences, University of Otago, Dunedin, New Zealand.
Abstract:
Upon fertilization, the egg must have the resources to facilitate successful fertilization and regulate zygotic growth prior to the activation of the embryonic genome. A key biomarker of egg activation is the synchronized release of cortical alveoli (CA) from the egg's cortex into the perivitelline space. Teleost CA are primarily associated with their highly conserved roles in polyspermy prevention. However, several CA-associated proteins with functions related to innate immunity have been isolated. While there is growing evidence that teleost CA have extended biological roles outside of polyspermy prevention, little work has been done toward developing an understanding of their general proteomic composition. Therefore, the aim of this study was to identify proteins which were proportionally over-represented in the zebrafish (Danio rerio) perivitelline fluid (PVF) directly following CA exocytosis to identify a candidate list of CA-associated proteins. This study utilized a novel technique for PVF extraction from water-activated eggs shortly following CA exocytosis which negated the use of fixatives, thereby increasing PVF sample integrity for downstream mass-spectrometry analysis. Moreover, this study provides the first comparative proteomic analysis of the PVF relative to the yolk and cytoplasm of the zebrafish egg. As a result, 44 proteins were identified which were proportionally over-represented in the PVF, relative to the yolk and cytosol, of the water-activated unfertilized egg. The resulting PVF proteome was comprised of proteins associated with functions in carbohydrate binding and peptidase regulation. Many of these proteins are compelling candidates for being CA-derived and have been previously implicated in innate immunity.
Related Concept Videos
Comparing the Survival Analysis of Two or More Groups
Alveoli and Alveolar Ducts
Proteomics
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
The Fluid Mosaic Model
Comparative Excretory Systems
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...

