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Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems
Published on: June 13, 2025
A Blockchain-Based Framework With Zero-Knowledge Proof Incorporated for Safeguarded Sharing of Genomic Data Through
Nandini Krishappa1, Girisha Gowdra Shivappa1, Sharon Zachariah1
1Department of Computer Science and Engineering, Dayananda Sagar University, Bengaluru South, Karnataka, India.
None:
Genomic data sharing remains a core problem in precision medicine because genomic data are highly sensitive and unchangeable. In this article, we propose a blockchain-based framework that utilizes zero-knowledge proofs (ZKPs), smart contracts, and off-chain storage to facilitate secure, privacy-preserving data sharing within health record systems. We implemented and evaluated a proof-of-concept prototype in Python on a simulated genomic dataset. The prototype uses a hybrid storage system where metadata is retained on a blockchain and encrypted data are placed in an emulated InterPlanetary File System (IPFS). Rule-based access is controlled using smart contracts, while privacy and security are achieved using ZKPs with interactive Schnorr protocol and elliptic curve cryptography (ECC). Empirical analysis using real-time testing over 100 iterations reported an average zero-knowledge proof with blockchain (ZKPB) query latency of 5.83 ms with a 90.00% accuracy, smart contract latency of under 0.01 ms with 90.00% accuracy, blockchain query time of 0.01 ms with 90.00% accuracy, and ECC latency of 8.72 ms with 90.00% accuracy. These empirical findings validate the effectiveness and privacy guarantees of the framework, which can be utilized in healthcare research, clinical genomics, and personalized medicine workflows.
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