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Label-Free Quantitative Proteomics Workflow for Discovery-Driven Host-Pathogen Interactions
Published on: October 20, 2020
Cross-Kingdom Global Proteomics Reveals Specific Modulation of Disease Signaling in Multi-Host Fungal Pathogen
Kanika Narula1, Shobha Ghosh1, Iqra Nafees Khan1
1National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India.
Abstract:
An interconnected loop of messages and counter-messages determine the outcome of host-pathogen interactions. Multihost pathogenicity across plants and animals, particularly nematode, is a major source of new infectious diseases. Fusarium oxysporum, a multihost pathogen, causes vascular wilt in chickpea and fusariosis in worm and humans. To comprehend Fusarium-responsive multihost pathogenicity, we temporally profiled cross-kingdom species, chickpea and worm using SWATH-mass spectrometry. Morphological analyses revealed that increased wilting and intestinal disintegration elicits a disease response in chickpea and worm. Peptide-spectrum library consisted of 5629 and 3138 proteins from Fusarium infected chickpea and worm, respectively. SWATH analysis identified 1573 and 2249 disease-responsive chickpea (CaDRPs) and worm proteins (CeDRPs) linked to diverse organs, organelles, and functionality. Pairwise comparisons; over-representation analysis between time, treatment, and organism; wilt, and fusariosis diseasome revealed common and unique modules. CaDRPs involved in preformed defense, biomolecule synthesis, phytohormone regulation, ser/thr kinase, and ATP signaling have perturbed interactions and functions, majorly in chloroplast. CeDRPs linked to the cuticular support, muscle organization, neuronal information, intestinal metabolism, G-protein, and notch signaling showed a deregulated function, especially in the cytoplasm. Common biological processes, included primary metabolism, ribosome biogenesis, calcium signaling, and proteostasis. Our data provide first evidence of translational plasticity in the Fusarium diseasome providing novel insights into multihost pathogenesis.
Insights
Fusarium oxysporum causes disease in plants and animals. This study reveals common and unique protein responses in chickpea and worm, offering insights into multihost pathogenesis.
Area of Science:
- Plant Pathology
- Nematology
- Microbiology
- Molecular Biology
Background:
- Multihost pathogens like Fusarium oxysporum pose significant threats, causing diseases in diverse hosts including plants, worms, and humans.
- Understanding host-pathogen interactions is crucial for managing infectious diseases that cross kingdoms.
- Fusarium oxysporum causes vascular wilt in chickpea and fusariosis in Caenorhabditis elegans (worm) and humans.
Purpose of the Study:
- To investigate the molecular mechanisms underlying Fusarium oxysporum's multihost pathogenicity.
- To identify and compare disease-responsive proteins in chickpea and worm following Fusarium infection.
- To elucidate common and unique cellular processes involved in cross-kingdom pathogenesis.
Main Methods:
- Temporal proteomic profiling of chickpea and worm infected with Fusarium oxysporum using SWATH-mass spectrometry.
- Morphological analysis to assess disease severity in both host organisms.
- Bioinformatic analyses including pairwise comparisons and over-representation analysis of identified proteins.
Main Results:
- SWATH analysis identified 1573 disease-responsive chickpea proteins (CaDRPs) and 2249 worm proteins (CeDRPs).
- CaDRPs were mainly associated with defense, synthesis, and signaling pathways in chloroplasts, while CeDRPs were linked to structural, metabolic, and signaling pathways in the cytoplasm.
- Common biological processes affected in both hosts included primary metabolism, ribosome biogenesis, calcium signaling, and proteostasis.
Conclusions:
- This study provides the first evidence of translational plasticity in the Fusarium diseasome.
- The findings offer novel insights into the molecular basis of multihost pathogenesis by Fusarium oxysporum.
- Understanding these conserved and unique responses can inform strategies against cross-kingdom infectious diseases.
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