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Isolation of Intermediate Filament Proteins from Multiple Mouse Tissues to Study Aging-associated Post-translational Modifications
Published on: May 18, 2017
Largely Distinct Post-Translational Modifications Differentiate Skeletal Muscle Wasting Caused by Cancer,
Anna Stephan1, Flavia A Graca1, Suresh Poudel2
1Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Background:
Skeletal muscle wasting and weakness are prominent disease features. Originally considered to arise from common transcriptional changes, recent analyses demonstrated that different stimuli induce muscle wasting via largely distinct mRNA and protein changes.
Methods:
Here, we examined the post-translational modifications (PTMs) associated with muscle wasting induced by cancer (n = 15 078), dexamethasone (n = 15 078) and aging (n = 8777) in mice by utilising the JUMPptm pipeline to recover modified peptides from TMT (tandem mass tag) mass spectrometry analyses.
Results:
We find that most PTMs that are significantly regulated are stimulus-specific and that only a few are cross-shared (n = 10; p < 0.05). These include P27 dihydroxylation of Lrpprc (leucine-rich pentatricopeptide repeat containing), an RNA binding protein and transcriptional co-activator mutated in Leigh syndrome, a mitochondrial disease. Contrary to the stimulus-specificity of other atrophy-associated PTMs, P27 dihydroxylation of Lrpprc declines (~20%; p < 0.05) with muscle wasting irrespective of the atrophic trigger. Electroporation of dihydroxylation-resistant LrpprcP27A (which mimics the reduction in Lrpprc dihydroxylation that occurs with atrophy) reduces muscle force in young (~23%-39%; p < 0.01) and old (~26%-36%; p < 0.01) male mice compared to the contralateral electroporation of LrpprcWT, indicating that a decline in Lrpprc P27 dihydroxylation contributes to muscle weakness in response to diverse catabolic stimuli. Comparison of LrpprcWT versus GFP electroporation indicates that there are mostly non-significant effects (p > 0.05) on muscle force in young and old mice. Mechanistically, LrpprcP27A does not affect proteostasis and mitochondrial function compared to control LrpprcWT but impairs (> 60% decline; p < 0.05) the expression of genes necessary for muscle strength, including the apelin receptor Aplnr and Col6a2/6 collagens. Moreover, LrpprcP27A reduces type 2b myofibre size (13% decline; p < 0.01) in old but not in young age.
Conclusions:
These analyses identify atrophy-associated PTMs that provide refined biomarkers for fingerprinting the atrophic stimulus. Although most PTMs are stimulus-specific, P27 dihydroxylation of Lrpprc declines during muscle wasting induced by cancer, dexamethasone and aging, suggesting that this is a general atrophy marker. Experimental up-regulation of the atrophy-mimicking variant LrpprcP27A reduces muscle force compared to wild-type Lrpprc in young and old mice, suggesting that atrophy-associated P27 dihydroxylation contributes to disease-associated muscle weakness.
Insights
Skeletal muscle wasting is linked to distinct post-translational modifications (PTMs). A specific PTM, Lrpprc P27 dihydroxylation, declines across various conditions, contributing to muscle weakness.
Area of Science:
- Biochemistry
- Molecular Biology
- Muscle Physiology
Background:
- Skeletal muscle wasting and weakness are key features of various diseases.
- Previously, muscle wasting was thought to stem from common transcriptional changes.
- Recent findings indicate that distinct stimuli induce muscle wasting through largely different mRNA and protein alterations.
Purpose of the Study:
- To investigate post-translational modifications (PTMs) associated with muscle wasting.
- To identify common and stimulus-specific PTMs in muscle atrophy.
- To elucidate the role of Lrpprc P27 dihydroxylation in muscle weakness.
Main Methods:
- Utilized the JUMPptm pipeline for mass spectrometry analysis of modified peptides.
- Examined PTMs in mouse models of muscle wasting induced by cancer, dexamethasone, and aging.
- Performed electroporation experiments with wild-type and mutant Lrpprc to assess functional impact.
Main Results:
- Most regulated PTMs were stimulus-specific, with only a few shared across conditions.
- P27 dihydroxylation of Lrpprc (leucine-rich pentatricopeptide repeat containing) consistently declined with muscle wasting.
- Electroporation of a dihydroxylation-resistant Lrpprc variant reduced muscle force and impaired expression of muscle strength genes.
Conclusions:
- Identified atrophy-associated PTMs as potential biomarkers for specific atrophic stimuli.
- P27 dihydroxylation of Lrpprc serves as a general marker for muscle wasting.
- The decline in Lrpprc P27 dihydroxylation contributes to muscle weakness in diverse catabolic conditions.
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