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Updated: Feb 14, 2026

Incorporation of a Survivable Liver Biopsy Procedure in Mice to Assess Non-alcoholic Steatohepatitis NASH Resolution
Published on: April 16, 2019
Classification of liver tissue pathological changes via optical biopsy based on refractive index sensing
Kacper Cierpiak1, Sebastián García-Galán2, Jakub Czubek1
1Department of Optoelectronics, Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, 11/12 Narutowicza Street, Gdansk, 80-233, Poland; Opto and Neurophotonics Laboratory, Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, Gdańsk, Poland.
None:
Optical biopsy enables minimally invasive, quantitative tissue assessment, yet clinically useful implementations require rapid and objective decision-making from compact sensors. We present a refractive-index (RI) driven classification framework based on reflection spectra acquired with an extrinsic fiber-optic Fabry-Pérot interferometric cavity (280 μm) over the biologically relevant RI range 1.33-1.42. Three proxy classes ("healthy", "HCC-like", "metastatic") were defined using literature-guided RI windows for liver tissue, and measurements were performed on certified reference liquids. As a physics-only reference, RI was estimated analytically from fringe periodicity in the wavenumber domain, achieving 0.70 accuracy and 0.48 macro-F1. To enhance discrimination, we engineered 62 spectral descriptors capturing fringe spacing (RI-related), fringe visibility, and spectral-shape cues, and trained tree-ensemble and SVM models together with an interpretable GA-optimized fuzzy expert system. On a held-out test set, tree ensembles reached macro-F1 = 1.00, while SVM and the fuzzy system achieved 0.96 and 0.97, respectively. Feature attribution identified RI as the dominant discriminative signal, with visibility-related metrics improving robustness near the HCC-like boundary. These results demonstrate that ML-augmented fiber-optic interferometry can deliver accurate and explainable diagnostic signatures, supporting the translational potential of RI-based optical biopsy.
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