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Updated: Feb 26, 2026

Sequencing Small Non-coding RNA from Formalin-fixed Tissues and Serum-derived Exosomes from Castration-resistant Prostate Cancer Patients
Published on: November 19, 2019
Genetic and epigenetic mechanisms underlying treatment-induced neuroendocrine prostate cancer
Viriya Keo1, Xiaodong Lu1, Jonathan C Zhao2,3
1Department of Urology, Emory University School of Medicine, Atlanta, United States.
Abstract:
Treatment-induced neuroendocrine prostate cancer (t-NEPC) is a lethal subtype of castration-resistant prostate cancer (CRPC) characterized by unique pathological features and molecular changes, including the loss of androgen receptor (AR) activities and the gain of neuroendocrine gene expression. The incidence of t-NEPC has increased substantially in the last decade, in up to 20 % of CRPC cases, largely due to intensive treatment of advanced prostate cancer (PCa) with AR pathway inhibitors (ARPi). While genomic alterations between CRPC and t-NEPC are largely conserved, their epigenetic programs are markedly distinct. The molecular mechanisms underlying the neuroendocrine transformation (NET) of PCa are rapidly emerging. Here, we first briefly summarize the genetic drivers of t-NEPC and then comprehensively review 2D and 3D chromatin alterations, including changes in DNA methylation, histone modifications, chromatin accessibility, and 3D chromatin organization, during NET of PCa. We then review key molecular regulators, including lineage-specific transcription factors and chromatin modifiers, of such epigenetic programs. Lastly, we discuss evidence that suggests a mixed model of clonal selection and transformation that underlies NEPC progression.
Insights
Treatment-induced neuroendocrine prostate cancer (t-NEPC) arises from advanced prostate cancer (PCa) treatment. Epigenetic changes, not just genetics, drive this lethal subtype
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Treatment-induced neuroendocrine prostate cancer (t-NEPC) is a lethal subtype of castration-resistant prostate cancer (CRPC).
- Its incidence has risen due to androgen receptor pathway inhibitors (ARPi) in advanced prostate cancer (PCa).
- t-NEPC exhibits distinct epigenetic programs compared to CRPC, despite conserved genomic alterations.
Purpose of the Study:
- To review the genetic drivers of t-NEPC.
- To comprehensively examine 2D and 3D chromatin alterations during neuroendocrine transformation (NET) in PCa.
- To identify key molecular regulators of these epigenetic programs.
Main Methods:
- Review of genetic drivers in t-NEPC.
- Comprehensive review of 2D and 3D chromatin alterations (DNA methylation, histone modifications, chromatin accessibility, 3D organization) during PCa NET.
- Review of molecular regulators including transcription factors and chromatin modifiers.
Main Results:
- Genomic alterations are largely conserved between CRPC and t-NEPC.
- Epigenetic programs are markedly distinct, involving significant chromatin alterations.
- Key molecular regulators, including transcription factors and chromatin modifiers, orchestrate these epigenetic changes.
Conclusions:
- Epigenetic reprogramming is a critical mechanism underlying the neuroendocrine transformation of prostate cancer.
- A mixed model of clonal selection and transformation likely drives NEPC progression.
- Understanding these epigenetic mechanisms is crucial for developing new therapeutic strategies against t-NEPC.
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