Related Experiment Video
Updated: Feb 28, 2026

Assessment of Global DNA Double-Strand End Resection using BrdU-DNA Labeling coupled with Cell Cycle Discrimination Imaging
Published on: April 28, 2021
The nuclease EXO1 promotes genomic instability by degrading nascent DNA in BRCA-proficient cells
Alexandra Nusawardhana1, Claudia M Nicolae1, George-Lucian Moldovan2
1Department of Molecular and Precision Medicine, The Pennsylvania State University College of Medicine, Hershey, PA, USA.
Abstract:
DNA repair genes are generally considered tumor suppressors, as their inactivation is observed in tumors and is associated with carcinogenesis. Mutations in BRCA1 and BRCA2 genes are observed in breast, ovarian, and other cancers. This results in defective homologous recombination DNA repair, as well as in degradation of nascent DNA during replication stress, catalyzed by exonucleases including EXO1 and MRE11. However, most tumors are BRCA pathway-proficient. Here, we show that EXO1 is overexpressed in a significant proportion of tumors. EXO1 overexpression causes the degradation of nascent DNA at both single stranded DNA (ssDNA) gaps and reversed replication forks. Importantly, this degradation occurs efficiently in BRCA-proficient cells, through cooperation with MRE11. This results in increased double strand break formation and hypersensitivity to genotoxic agents. We thus identify increased EXO1 activity as a mechanism of genomic instability similar to BRCA pathway inactivation, but occurring more frequently in tumors compared to BRCA inactivation.
Insights
Overexpressed EXO1 in tumors degrades nascent DNA, causing genomic instability similar to BRCA mutations. This DNA repair defect occurs frequently in BRCA-proficient cancers, increasing double-strand breaks.
Area of Science:
- Genetics
- Molecular Biology
- Cancer Research
Background:
- DNA repair genes, like BRCA1 and BRCA2, are tumor suppressors; their inactivation leads to cancer.
- Defects in homologous recombination repair and nascent DNA degradation by EXO1 and MRE11 are linked to carcinogenesis.
- Most tumors retain BRCA pathway proficiency.
Purpose of the Study:
- To investigate the role of EXO1 in BRCA-proficient tumors.
- To determine if EXO1 overexpression contributes to genomic instability.
- To identify novel mechanisms of carcinogenesis in common cancers.
Main Methods:
- Analysis of EXO1 expression levels in tumor samples.
- In vitro studies to assess EXO1 activity in DNA repair.
- Assays measuring DNA double-strand breaks and replication fork stability.
Main Results:
- EXO1 is overexpressed in a significant subset of tumors.
- Overexpressed EXO1 promotes nascent DNA degradation at ssDNA gaps and reversed forks in BRCA-proficient cells.
- This degradation, mediated by MRE11 cooperation, leads to increased double-strand breaks and sensitivity to genotoxic agents.
Conclusions:
- Increased EXO1 activity is a mechanism of genomic instability.
- This mechanism mimics BRCA pathway inactivation but is more prevalent in tumors.
- EXO1 overexpression represents a potential therapeutic target in a broader range of cancers.
More Related Videos
06:10A Fluorescence-based Exonuclease Assay to Characterize DmWRNexo, Orthologue of Human Progeroid WRN Exonuclease, and Its Application to Other Nucleases
Published on: December 23, 2013
05:55Author Spotlight: Unveiling the Role of SNF2L in Replication Fork Stability and Genome Duplication
Published on: August 23, 2024
Related Concept Videos
Nucleotide Excision Repair
Nucleotide Excision Repair
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Base Excision Repair
The first step of...
Base Excision Repair
Homologous Recombination
Nucleosome Remodeling
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...