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Published on: November 30, 2016
Expression Analysis of miRNA Profiles in Colorectal Cancer with a Bioinformatics Approach: An Emphasis on miR-4295,
Recep Eskin1, Turkan Gurer1, Alper Aytekin2
1Department of Biology, Faculty of Art and Science, Gaziantep University, Gaziantep 27310, Turkey.
None:
Background/Objectives: This study aimed to determine the potential roles of miR-4295, miR-4720-5p, miR-4773, miR-6831-5p, and miR-7161-5p in colorectal cancer by evaluating their expression levels in matched tumor and adjacent non-tumor tissues from 86 patients. Methods: A total of 172 samples were analyzed, and the associations between miRNA expression levels and clinicopathological characteristics were assessed, along with correlations among the miRNAs. Functional enrichment analyses, including GO and KEGG pathway evaluations, were performed using DIANA-mirPath v.3 to characterize biological processes and signaling pathways associated with the predicted target genes. Results: The results showed that miR-4295 and miR-4720-5p were significantly upregulated in tumor tissues, while miR-4773 and miR-6831-5p were significantly downregulated (p < 0.001). No significant difference in miR-7161-5p expression was observed between tumor and non-tumor tissues (p = 0.877). KEGG analysis indicated that miR-4295, miR-4720-5p, miR-4773, and miR-6831-5p regulate genes involved in the TGF-β, mTOR, ErbB, FoxO, and endocytosis signaling pathways. Conclusions: These findings suggest that miR-4295 and miR-4720-5p may have oncogenic functions, while miR-4773 and miR-6831-5p may have tumor-suppressing functions, and that this relationship may contribute to the development of colorectal cancer.
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