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Let-7a and miR-34a Interplay Potent Suppressive Roles in Hepatocellular Carcinoma via Co-Targeting FNDC3B, IGF2 and
Bangly Soliman1,2, Ahmed Fawzy Ibrahim3, Ahmed Salem1
1Department of Biochemistry, Faculty of Science, Ain Shams University, Cairo 1156, Egypt.
Abstract:
Both let-7a and miR-34a have been repeatedly studied as pivotal suppressors for Hepatocellular carcinoma; however, their combined regulations remain to be fully elucidated. In the present study, we performed a comprehensive in silico analysis for let-7a and miR-34a using a wealth of updated tools: miRWalk, Genetrail and miRnet. In addition, our study is the first to quantify both miRs and their three predicted yet not experimentally validated oncogenic targets: FNDC3B, IGF2 and SOX4. This was assessed in HepG2 cell model following treatment by PEGP-vector expressing the miRs by MTT assay, florescence microscopy, qPCR and immune-florescence. Our bioinformatics analysis revealed a pool of common predicted hepatocarcinogenic targets shared by both let-7a and miR-34a. Importantly, three targets were identified as co-regulated through multiple canonical binding sites for each miR, and these had not been experimentally validated before. Furthermore, functional enrichment of these putative targets demonstrated their significant involvement in major and emerging HCC hallmarks, such as reprogramming of energy metabolism and evading immune destruction. These findings support our concept of simultaneous co-regulation of these oncogenes through the signaling networks and GO terms associated with both miRs. Consistently, our experimental results verified the significant overexpression of both miRs in HepG2 cells, leading to reduced tumor cell proliferation and decreased levels of the three oncogenic transcripts. Interestingly, miR-34a exhibited a superior suppression effect, reaching 38.7%, and SOX4 was identified as the most significantly downregulated target at both transcriptional and translational levels. Our findings provide new insights into the interconnected anti-HCC effects of let-7a and miR-34a and highlight the potential of applying their combined use to achieve the best therapeutic outcomes for this invasive tumor.
Insights
let-7a and miR-34a microRNAs suppress Hepatocellular carcinoma (HCC) by downregulating oncogenic targets like SOX4. Their combined use shows therapeutic potential against this invasive tumor.
Area of Science:
- Molecular Biology
- Oncology
- Bioinformatics
Background:
- let-7a and miR-34a are known Hepatocellular carcinoma (HCC) suppressors.
- Their combined regulatory mechanisms in HCC remain largely unelucidated.
Purpose of the Study:
- To comprehensively analyze the in silico targets of let-7a and miR-34a.
- To experimentally validate the co-regulation of specific oncogenic targets (FNDC3B, IGF2, SOX4) by these microRNAs.
- To investigate the anti-HCC effects of combined let-7a and miR-34a expression.
Main Methods:
- In silico analysis using miRWalk, Genetrail, and miRnet.
- Experimental validation in HepG2 cells using MTT assay, fluorescence microscopy, qPCR, and immunofluorescence.
- Quantification of let-7a, miR-34a, and their predicted targets (FNDC3B, IGF2, SOX4).
Main Results:
- Bioinformatics analysis identified common predicted hepatocarcinogenic targets for both let-7a and miR-34a.
- Three targets (FNDC3B, IGF2, SOX4) were identified as co-regulated and experimentally validated.
- Overexpression of let-7a and miR-34a in HepG2 cells reduced tumor cell proliferation and downregulated target transcripts.
- miR-34a demonstrated a superior suppression effect, and SOX4 was the most significantly downregulated target.
Conclusions:
- let-7a and miR-34a exhibit interconnected anti-HCC effects through co-regulation of oncogenic targets.
- Combined application of let-7a and miR-34a holds potential for improved therapeutic outcomes in Hepatocellular carcinoma.
- Findings provide new insights into targeting energy metabolism and immune evasion in HCC.
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