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Targeting tRNA-Arg-TCT-4-1 suppresses cancer cell growth and tumorigenesis
Esteban A Orellana1,2,3, Isobel E Bowles1,2, Xin Yang3,4
1Department of Molecular and Systems Biology, Geisel School of Medicine at Dartmouth. Hanover, NH, 03755 USA.
Abstract:
tRNAs play a critical role in protein synthesis, influencing mRNA translation dynamics to shape proteomes. Emerging evidence links dysregulated tRNA activity to cancer progression, with tRNA-Arg-TCT identified as an oncogenic driver when ectopically overexpressed in non-malignant cells. The requirement of endogenous tRNA-Arg-TCT in cancer biology, however, remains untested. Moreover, considering that the tRNA-Arg-TCT family comprises six genes in humans, the importance of an individual tRNA isodecoder in cancer remains unknown. Here, we find elevated levels of tRNA-Arg-TCT-4-1 isodecoder are associated with poor patient prognosis across multiple cancer types. We demonstrate that, using different antisense RNA strategies, specific inhibition of tRNA-Arg-TCT-4-1 suppresses the growth of glioblastoma (GBM) and liposarcoma (LPS) cancer cells. Mechanistically, we find that tRNA-Arg-TCT-4-1 inhibition leads to a codon-biased remodeling of mRNA translation and the proteome, preferentially suppressing expression of growth-promoting genes and pathways encoded by mRNAs enriched in arginine AGA codons. Strikingly, intratumoral delivery of an antisense oligonucleotide (ASO) targeting tRNA-Arg-TCT-4-1 suppresses tumor growth and extends survival in mouse xenograft experiments performed using either a human LPS cell line or a patient-derived soft tissue sarcoma model. This study provides a foundation for targeting tRNA dysregulation as a novel therapeutic approach for cancer.
Insights
This study reveals that elevated tRNA-Arg-TCT-4-1 levels correlate with poor cancer prognosis. Inhibiting this specific transfer RNA (tRNA) with an antisense oligonucleotide (ASO) suppressed tumor growth and improved survival in preclinical models.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- Transfer RNAs (tRNAs) are crucial for protein synthesis and can influence cancer progression.
- The specific role of endogenous tRNA-Arg-TCT isodecoders in cancer remains largely unexplored.
- tRNA-Arg-TCT-4-1 is a potential oncogenic driver whose necessity in cancer has not been established.
Purpose of the Study:
- To investigate the role of the tRNA-Arg-TCT-4-1 isodecoder in human cancers.
- To determine if inhibiting tRNA-Arg-TCT-4-1 can suppress cancer cell growth and tumor progression.
- To explore the therapeutic potential of targeting tRNA-Arg-TCT-4-1 in cancer treatment.
Main Methods:
- Analysis of tRNA-Arg-TCT-4-1 expression levels in patient data across various cancer types.
- Utilizing antisense RNA strategies to specifically inhibit tRNA-Arg-TCT-4-1 in glioblastoma (GBM) and liposarcoma (LPS) cell lines.
- Investigating the impact of tRNA-Arg-TCT-4-1 inhibition on mRNA translation and proteome remodeling.
- Conducting intratumoral delivery of an antisense oligonucleotide (ASO) targeting tRNA-Arg-TCT-4-1 in mouse xenograft models.
Main Results:
- Elevated tRNA-Arg-TCT-4-1 levels are associated with poor patient prognosis in multiple cancers.
- Specific inhibition of tRNA-Arg-TCT-4-1 suppressed the growth of GBM and LPS cancer cells.
- tRNA-Arg-TCT-4-1 inhibition induced codon-biased translation changes, reducing expression of growth-promoting genes.
- Intratumoral ASO delivery targeting tRNA-Arg-TCT-4-1 suppressed tumor growth and extended survival in preclinical models.
Conclusions:
- tRNA-Arg-TCT-4-1 is a critical driver in certain cancers and a potential therapeutic target.
- Antisense oligonucleotide (ASO)-mediated inhibition of tRNA-Arg-TCT-4-1 shows promise for cancer therapy.
- Targeting tRNA dysregulation represents a novel strategy for cancer treatment.
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