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Updated: Mar 1, 2026

Co-analysis of Brain Structure and Function using fMRI and Diffusion-weighted Imaging
Published on: November 8, 2012
Modelling Motion-Induced Signal Corruption in Steady-State Diffusion MRI
Benjamin C Tendler1, Wenchuan Wu1, Karla L Miller1
1Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK.
Purpose:
Diffusion-weighted steady-state free precession (DW-SSFP) is a diffusion imaging sequence achieving high SNR efficiency. A key challenge for in vivo DW-SSFP is the sequence's severe motion sensitivity, currently limiting investigations to low or no motion regimes. Here we establish a framework to both (1) model and (2) correct for the impact of subject motion associated with the underlying magnetisation distribution of DW-SSFP.
Theory And Methods:
An extended phase graphs (EPG) representation of the 1D DW-SSFP signal was established incorporating a motion operator describing rigid body and pulsatile motion. The representation was validated using Monte Carlo simulations, and subsequently integrated into a data fitting routine for motion estimation and correction. The fitting routine was evaluated using both simulations and a voxelwise correction applied to in vivo experimental 2D low-resolution single-shot timeseries DW-SSFP data acquired in the human brain in three healthy volunteers, with a tensor reconstructed from the motion-corrected experimental DW-SSFP data.
Results:
The proposed EPG-motion framework gives excellent agreement to complementary Monte Carlo simulations, demonstrating that diffusion coefficient estimation is robust over a range of motion and SNR regimes. Tensor estimates from the motion-corrected experimental DW-SSFP data give good visual agreement to complementary diffusion-weighted spin-echo (DW-SE) data acquired in the same subject, considerably reducing orientation-dependent motion-induced biases.
Conclusion:
Temporal information capturing the evolution of the DW-SSFP signal can be used to retrospectively (1) estimate subject motion and (2) reconstruct motion-corrected DW-SSFP data. Open-source software is provided, facilitating future investigations into the impact of subject-motion on DW-SSFP acquisitions.
Insights
We developed a new framework to model and correct for subject motion in diffusion-weighted steady-state free precession (DW-SSFP) imaging. This method improves diffusion tensor imaging by reducing motion-induced biases.
Area of Science:
- Magnetic Resonance Imaging
- Diffusion Imaging
- Biophysics
Background:
- Diffusion-weighted steady-state free precession (DW-SSFP) offers high signal-to-noise ratio (SNR) efficiency for diffusion imaging.
- Subject motion is a significant challenge in in vivo DW-SSFP, limiting its application to low-motion scenarios.
- Accurate diffusion measurements are crucial for understanding tissue microstructure and disease.
Purpose of the Study:
- To establish a framework for modeling and correcting subject motion in DW-SSFP imaging.
- To address the motion sensitivity limitations of DW-SSFP for in vivo applications.
- To enable robust diffusion tensor estimation in the presence of physiological motion.
Main Methods:
- Developed an extended phase graphs (EPG) model incorporating a motion operator for DW-SSFP signals.
- Validated the EPG-motion model using Monte Carlo simulations.
- Integrated the model into a data fitting routine for motion estimation and correction, applied to in vivo human brain data.
Main Results:
- The EPG-motion framework demonstrated excellent agreement with simulations, showing robust diffusion coefficient estimation across various motion and SNR levels.
- Motion-corrected DW-SSFP tensor estimates showed good visual agreement with diffusion-weighted spin-echo (DW-SE) data.
- The method significantly reduced orientation-dependent motion-induced biases in diffusion tensor imaging.
Conclusions:
- Temporal signal evolution in DW-SSFP can be leveraged for retrospective motion estimation and correction.
- The developed framework enables the reconstruction of motion-corrected DW-SSFP data.
- Open-source software is provided to facilitate future research on motion impacts in DW-SSFP acquisitions.

