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Updated: Mar 7, 2026

Profiling Sensitivity to Targeted Therapies in EGFR-Mutant NSCLC Patient-Derived Organoids
Published on: November 22, 2021
Genomic Profiling of Epidermal Growth Factor Receptor Mutation-Positive Non-Small Cell Lung Cancer Post-Progression
Helena A Yu1, Kwan Ho Tang2, Aleksandra A Markovets2
1Memorial Sloan Kettering Cancer Center New York, New York United States.
Understanding resistance mechanisms after first-line osimertinib treatment in EGFR-mutated non-small cell lung cancer (NSCLC) is crucial. The ORCHARD study identified common resistance alterations, informing potential combination therapies for improved patient outcomes.
Area of Science:
- Oncology
- Genomics
- Molecular Biology
Background:
- Osimertinib is a standard first-line treatment for EGFR-mutated non-small cell lung cancer (NSCLC).
- Understanding resistance mechanisms post-osimertinib is vital for developing effective second-line therapies.
- The ORCHARD study investigated the tumor molecular profile following progression on first-line osimertinib.
Purpose of the Study:
- To explore mechanisms of resistance to first-line osimertinib in EGFR-mutated NSCLC.
- To characterize the histo-genomic landscape after osimertinib treatment.
- To assess agreement between tissue and plasma next-generation sequencing (NGS).
Main Methods:
- Phase II biomarker-directed study (ORCHARD, NCT03944772).
- Enrolled patients with EGFR-mutated NSCLC progressing on first-line osimertinib.
- Tumor molecular profiling via NGS of tissue and plasma samples.
Main Results:
- Comprehensive genomic data from 400 tissue and 191 plasma samples.
- TP53 and MDM2/4 alterations occurred in 85% of tumors and were mutually exclusive.
- Resistance alterations detected in 87% of samples, with multiple alterations in 46%.
- PI3K pathway, SOX2, and MYC alterations frequent in transformed tumors.
- Differential EGFR mutation patterns observed based on mutation type (L858R vs. exon 19 deletion).
Conclusions:
- Heterogeneous resistance mechanisms to first-line osimertinib are highlighted.
- Findings provide a rationale for combination therapies targeting resistance.
- Improved patient outcomes may be achieved through broad-acting combination treatments.
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