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Tandem mass spectrometry is a technique that uses multiple mass analyzers in series to obtain a higher selectivity and reduce chemical noise during analyte detection. Instruments with multiple analyzers separated by an interaction cell enable secondary fragmentation and selected study of the fragment ions.Secondary fragmentations occur in the interaction cell and can be induced by various factors. Fragmentation induced by collision with inert gases, such as N2, Ar, He, etc., is called...
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Shared-autosampler parallel LC-MS/MS platform for high-throughput multi-analyte quantification in complex matrices.

Shanshan Cai1, Qisheng Zhong2, Jiaqi Liu2

  • 1School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China.

Journal of Chromatography. A
|March 10, 2026
PubMed
Summary
This summary is machine-generated.

A novel parallel liquid chromatography-tandem mass spectrometry (LC-MS/MS) strategy uses shared hardware to analyze diverse analytes in complex samples. This approach enhances analytical throughput and efficiency for multi-analyte quantification.

Keywords:
Complex matricesHigh-throughput analysisMulti-analyte quantificationParallel chromatographyShared-autosampler LC–MS/MS

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Area of Science:

  • Analytical Chemistry
  • Biochemistry
  • Environmental Science

Background:

  • Simultaneous quantification of diverse analytes in complex matrices is challenging for single LC-MS methods.
  • Existing methods often face limitations in mobile-phase compatibility and dead volumes, especially in 2D-LC setups.
  • High-throughput analysis is crucial for modern analytical demands.

Purpose of the Study:

  • To develop a shared-autosampler parallel LC-MS/MS strategy for efficient multi-analyte quantification.
  • To overcome the limitations of traditional LC-MS and 2D-LC methods.
  • To demonstrate the strategy's flexibility and performance in complex matrix applications.

Main Methods:

  • Developed a parallel LC-MS/MS system with two independent LC pathways sharing one autosampler and MS detector.
  • Implemented sequential execution of two distinct chromatographic methods within a single analytical cycle.
  • Utilized selective Multiple Reaction Monitoring (MRM) acquisition and data-level signal integration without inter-dimensional coupling.

Main Results:

  • Successfully quantified 394 emerging contaminants in human serum within 28 min using an acidic/basic dual-method configuration.
  • Achieved simultaneous determination of 27 hypoglycemic agents across a wide log P range in a single 20 min run using HILIC/RP columns.
  • Demonstrated good linearity, low limits of quantification (<0.20 ng/mL for >90% analytes), and high precision (RSDs <10%) in both applications.

Conclusions:

  • The shared-autosampler parallel LC-MS/MS strategy offers a flexible and efficient platform for high-throughput quantification.
  • This method improves analytical throughput without requiring additional MS or autosampler hardware.
  • The strategy effectively addresses challenges in analyzing chemically diverse analytes within complex matrices.