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SpermFACS: Validation of a Highly Sensitive Sperm Cell Sorting Method for Sexual Assault Casework Analysis
Kristina Fokias1,2,3, Iene Rutten2,3, Karen Ven2,3
1KU Leuven, Forensic Biomedical Sciences, Department of Imaging & Pathology, Leuven 3000, Belgium.
Analytical Chemistry
|March 24, 2026
Summary
A new fluorescence-activated cell sorting (FACS) method, spermFACS, efficiently separates sperm cells for forensic DNA analysis. This technique improves DNA profiling from challenging samples, aiding sexual assault investigations.
Area of Science:
- Forensic Science
- Molecular Biology
- Genetics
Background:
- Sperm cell identification is crucial in sexual offense investigations.
- Differential lysis (DL) is the standard but often inadequate method for sperm separation.
- Limitations of DL include time consumption and poor DNA profiles from low sperm-to-epithelial cell ratios.
Purpose of the Study:
- To establish and validate a fluorescence-activated cell sorting (FACS) method, termed spermFACS, for routine sperm cell separation from vaginal swabs.
- To meet ISO/IEC 17025 guidelines for forensic implementation.
- To assess spermFACS's effectiveness in challenging forensic samples.
Main Methods:
- Development and validation of a FACS-based methodology (spermFACS).
- Separation of sperm cells from vaginal swab samples.
- Comparative analysis of spermFACS against differential lysis (DL).
- Assessment of DNA profile quality from mixed cell populations and aged samples.
Main Results:
- spermFACS successfully recovered informative male autosomal DNA profiles from mixtures with sperm/epithelial cell ratios as low as 1:7500.
- Effective DNA profiling was achieved from postcoital samples collected up to 120 hours after intercourse.
- spermFACS demonstrated superior separation efficiency and purity compared to DL, supported by likelihood ratio calculations.
Conclusions:
- spermFACS is a valuable tool for forensic analysis, particularly in delayed-report sexual assault cases.
- The method shows potential for deconvoluting complex mixtures, such as in multiple offender rapes.
- Integrating spermFACS into forensic workflows can enhance offender identification and case resolution.

