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Assessing the Performance of the DINOv2 Self-supervised Learning Vision Transformer Model for the Segmentation of the
Bipasha Kundu1, Bidur Khanal1, Richard Simon2
1Center for Imaging Science, Rochester Institute of Technology, Rochester, NY 14623, USA.
Summary
DINOv2, a foundation model, shows strong performance in segmenting the left atrium (LA) from MRI scans. This approach requires less data and offers accurate cardiac segmentation for pre-operative planning.
Area of Science:
- Medical Image Analysis
- Artificial Intelligence in Medicine
- Cardiovascular Imaging
Background:
- Accurate left atrium segmentation is crucial for diagnosing and treating atrial fibrillation.
- Deep learning models for segmentation typically require large annotated datasets.
- Foundation models offer potential to reduce data dependency through transfer learning.
Purpose of the Study:
- To evaluate the out-of-the-box performance of the DINOv2 foundation model for left atrium segmentation using MRI images.
- To assess DINOv2's adaptability and generalization capabilities with limited annotated data.
- To demonstrate DINOv2's potential for accurate and consistent cardiac segmentation.
Main Methods:
- Utilized DINOv2, a self-supervised vision transformer-based foundation model, for left atrium segmentation.
- Performed end-to-end fine-tuning on MRI datasets.
- Conducted data-level few-shot learning experiments across various dataset sizes.
Main Results:
- Achieved a mean Dice score of 87.1% and an Intersection over Union (IoU) of 79.2% for left atrium segmentation.
- DINOv2 consistently outperformed baseline models across different dataset sizes and patient counts.
- Demonstrated effective adaptation and generalization to MRI data with minimal fine-tuning.
Conclusions:
- DINOv2 shows significant potential as a competitive tool for cardiac segmentation, even with limited data.
- The model provides accurate results essential for pre-procedural planning and pre-operative applications.
- Highlights DINOv2's utility for broader implementation in medical imaging modalities.

