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Published on: August 28, 2019
QSAR meets ecology: Predictive framework for assessing pesticide toxicity against mayfly using consensus modelling
Disha Mahapatra1, Shubha Das1, Pabitra Samanta1
1Drug Discovery and Development Laboratory (DDD Lab), Department of Pharmaceutical Technology, Jadavpur University, Kolkata, 700032, India.
Quantitative structure-activity relationship (QSAR) models predict pesticide toxicity to mayflies, reducing animal testing. Key biomarkers for toxicity include electronegative atoms and phosphate groups, aiding eco-friendly chemical design.
Area of Science:
- Environmental Toxicology
- Computational Chemistry
- Ecotoxicology
Background:
- Pesticide use poses ecological risks, necessitating efficient toxicity assessment.
- Traditional methods are costly, time-consuming, and ethically problematic due to animal testing.
- Quantitative Structure-Activity Relationship (QSAR) offers a predictive alternative.
Purpose of the Study:
- Develop robust QSAR models to predict pesticide toxicity to mayfly (Ephemera vulgata) species.
- Utilize OECD guidelines and LD50 endpoint for toxicity assessment.
- Identify key molecular descriptors indicative of pesticide toxicity.
Main Methods:
- Constructed Partial Least Squares (PLS)-based QSAR models.
- Validated models using internal and external validation parameters (R², Q²(LOO), Q²F1, Q²F2).
- Employed Intelligent Consensus Prediction (ICP) to enhance model reliability and external predictivity.
Main Results:
- Models demonstrated stability and robustness with high statistical parameter agreement.
- ICP improved external predictivity (Q²F1=0.726, Q²F2=0.722).
- Identified biomarkers: electronegative atoms, large fragments, aliphatic groups, less polar atoms, phosphate groups, and long carbon chains.
Conclusions:
- The developed QSAR framework effectively predicts pesticide toxicity to mayflies.
- Identified biomarkers can guide the design of safer, eco-friendly chemicals.
- This approach supports regulatory decision-making and sustainable development.
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