Related Experiment Video
Updated: Mar 28, 2026

Mapping Bacterial Functional Networks and Pathways in Escherichia Coli using Synthetic Genetic Arrays
Published on: November 12, 2012
Expanding TheCellMap.org to visualize a genome-scale genetic interaction network for a human cell line
Ira Horecka1,2, Matej Ušaj2, Myra P D Masinas2
1Department of Molecular Genetics, University of Toronto; Toronto ON, M5S 3E1, Canada.
Abstract:
Genetic interaction networks map functional connections between genes and their corresponding pathways and complexes. We previously developed TheCellMap.org as a central repository for storing and analyzing quantitative genetic interaction data produced by genome-scale Synthetic Genetic Array (SGA) analysis in the budding yeast, Saccharomyces cerevisiae. We have expanded TheCellMap.org to include ~89,000 quantitative genetic interactions identified from genome-scale CRISPR-based analysis of ~4 million human gene pairs in the haploid cell line, HAP1. TheCellMap.org enables users to readily access, visualize and explore human HAP1 genetic interactions, as well as to extract and reorganize sub-networks, applying data-driven network layouts in an intuitive and interactive manner.

