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Updated: Mar 29, 2026

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Explicit Features Versus Implicit Spatial Relations in Geomorphometry: A Comparative Analysis for DEM Error

Shuyu Zhou1, Mingli Xie1,2,3, Nengpan Ju1

  • 1State Key Laboratory of Geohazard Prevention and Geoenvironment Protection, Chengdu University of Technology, Chengdu 610059, China.

Sensors (Basel, Switzerland)
|March 28, 2026
PubMed
Summary
This summary is machine-generated.

Geometric deep learning (Graph Neural Networks) did not outperform traditional methods (XGBoost) for Digital Elevation Models with sparse data. Domain knowledge-based features proved more reliable than complex "black box" models.

Keywords:
DEM error correctionExplainable AI (XAI)Graph Neural Networks (GNNs)ICESat-2geospatial AImodel comparison

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Area of Science:

  • Geospatial analysis
  • Machine learning in Earth sciences
  • Digital Elevation Model (DEM) refinement

Background:

  • Global DEMs have biases due to acquisition geometry and surface penetration.
  • Sparse altimetry data presents challenges for accurate terrain modeling.
  • Evaluating advanced geometric deep learning against traditional methods is crucial.

Purpose of the Study:

  • To compare the performance of Graph Neural Networks (GNNs) against XGBoost for DEM accuracy improvement.
  • To assess if complex geometric deep learning justifies performance gains over feature engineering with sparse altimetry data.
  • To investigate the underlying mechanisms driving model performance differences.

Main Methods:

  • Comparative framework using four DEM products (ALOS World 3D, Copernicus DEM, SRTM GL1, TanDEM-X).
  • Utilized Sichuan Province, China, as a study area with sparse altimetry supervision.
  • Evaluated Hybrid GNN models against a systematically optimized XGBoost baseline.

Main Results:

  • Hybrid GNN models showed no statistically significant accuracy advantage over XGBoost (RMSE parity).
  • A scale mismatch between altimetry footprint spacing and terrain resolution was identified.
  • XGBoost relied on deterministic features (terrain aspect, vegetation density), while GNNs exhibited attribution stochasticity.

Conclusions:

  • For geospatial regression with sparse supervision, domain-knowledge-based physical features are superior to complex "black box" architectures.
  • "Physics Trumps Geometry" in scenarios with limited data.
  • Prioritizing explanatory stability over marginal accuracy gains is essential for trusted Geo-AI.