Related Experiment Video
Updated: Mar 31, 2026

Using In Vitro and In-cell SHAPE to Investigate Small Molecule Induced Pre-mRNA Structural Changes
Published on: January 30, 2019
Targeting RNA binding proteins with small-molecule inhibitors: Advances, challenges, and therapeutic opportunities
Yuning Shi1, Dazhi Feng1, Jieya Zhou1
1Department of Medicinal Chemistry, College of Pharmacy, China Pharmaceutical University, Nanjing 211198, China.
None:
RNA-binding proteins (RBPs) constitute central regulators of post-transcriptional gene expression and have been increasingly recognized as critical contributors to the pathogenesis of cancer, neurodegenerative disorders, and autoimmune diseases. However, in contrast to well-established drug targets such as kinases and G protein-coupled receptors, RBPs remain largely underexploited owing to their intrinsic structural heterogeneity, dynamic RNA interactions, and paucity of canonical ligand-binding pockets. In this review, we synthesize current knowledge on the roles of RBPs in disease, outline recent advances in the design of small-molecule modulators, and highlight innovative applications of high-throughput screening and chemical biology approaches for target identification and validation. We further discuss emerging concepts and challenges in translating RBP modulators into therapeutics, providing a forward-looking perspective on how these efforts may reshape small-molecule drug discovery in this evolving field.
Related Concept Videos
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
RNA Interference
Types of RNA
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Types of RNA
RNA Performs Diverse...
Experimental RNAi
siRNA - Small Interfering RNAs
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...

