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Development of Machine Learning Models for Predicting Prostate Cancer in Biopsy Candidates Using Prostate-Specific
Deniz Noyan Özlü1, Yusuf Arıkan2, Büşra Emir3
1Department of Urology, Bakırköy Dr. Sadi Konuk Training and Research Hospital, University of Health Sciences, Istanbul, Türkiye.
Machine learning models using PSA, MRI, and blood tests can predict prostate cancer biopsies. XGBoost achieved 94.74% sensitivity and 100% specificity, showing high accuracy for diagnosing prostate cancer.
Area of Science:
- Oncology
- Radiology
- Machine Learning
Background:
- Prostate-specific antigen (PSA) alone is insufficient for prostate cancer (PCa) diagnosis, especially in the 4-10 ng/mL range.
- Multiparametric magnetic resonance imaging (mpMRI) has limitations in the PCa diagnostic pathway.
- Hematologic parameters offer additional insights for PCa detection.
Purpose of the Study:
- Develop a biopsy prediction model for prostate cancer.
- Evaluate machine learning (ML) algorithms incorporating PSA, mpMRI, and hematologic data.
- Improve diagnostic accuracy for PCa in patients with PSA levels ≤10 ng/mL.
Main Methods:
- Included patients with PSA ≤10 ng/mL who underwent biopsy (2017-2024).
- Applied five ML techniques: logistic regression, random forest (RF), extra trees, XGBoost, and light GBM.
- Utilized PSA levels, mpMRI findings, and hematologic parameters for model development.
Main Results:
- XGBoost model achieved the highest accuracy with 94.74% sensitivity and 100% specificity.
- Random Forest (RF) model showed 78.95% sensitivity and 100% specificity.
- Key predictors included free/total PSA, PI-RADS score 4, and platelet-to-lymphocyte ratio.
Conclusions:
- XGBoost and RF models demonstrate excellent performance for PCa biopsy prediction.
- High AUC values (0.97 for XGBoost, 0.89 for RF) indicate strong predictive power.
- External validation is recommended to generalize ML model accuracy across diverse populations.
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