Oligonucleotides: Evolution of Carcinogenicity and Risk Assessment Strategy
1Ionis Pharmaceuticals, Inc., Carlsbad, California, USA.
Abstract:
Since 2006, the carcinogenic potential of antisense oligonucleotides (ASOs) has primarily been evaluated using standard 2-year rodent bioassays. To date, no human-relevant tumor findings have been identified across nonclinical ASO studies. As the field matures and more therapeutics advance into development, there is increasing support for carcinogenicity strategies that built on prior data, leverage platform-based risk assessments, and align with evolving regulatory guidance. In several programs, traditional 2-year mouse studies have been replaced by short-term assessments, such as the 6-month study in transgenic rasH2 mouse study, often conducted alongside a 2-year rat study in accordance with ICH S1B(R1). Historically, deviations from the standard two-species approach have been uncommon and typically limited to severe neurological indications or cases lacking an endogenous rodent target. Nevertheless, for eplontersen and olezarsen, carcinogenicity assessment was limited to a single Tg.rasH2 mouse study or fully waived, supported by prior two-species carcinogenicity data from inotersen and volanesorsen. With the recent ICH S1B(R1) addendum, sponsors now have a defined pathway to pursue carcinogenicity strategies, including potential waivers of the 2-year rat study when supported by the totality of evidence. This article reviews the evolving landscape of ASO carcinogenicity testing and highlights opportunities to reduce or waive long-term studies.
Insights
Antisense oligonucleotide (ASO) carcinogenicity testing is evolving. Shorter studies and data from related drugs can now support waiving long-term rodent bioassays, aligning with new regulatory guidance.
Area of Science:
- Pharmacology and Toxicology
- Drug Development
- Regulatory Science
Background:
- Antisense oligonucleotides (ASOs) carcinogenicity has been assessed via 2-year rodent bioassays since 2006.
- No human-relevant tumors have been found in nonclinical ASO studies to date.
- Evolving strategies leverage prior data, platform risk assessments, and regulatory guidance for ASO carcinogenicity testing.
Purpose of the Study:
- To review the changing landscape of ASO carcinogenicity testing.
- To highlight opportunities for reducing or waiving long-term carcinogenicity studies.
- To discuss the integration of new regulatory guidelines, such as ICH S1B(R1), into ASO testing strategies.
Main Methods:
- Review of historical and current ASO carcinogenicity testing approaches.
- Analysis of regulatory guidance, including ICH S1B(R1) addendum.
- Case examples of modified carcinogenicity assessments for ASO therapeutics (e.g., eplontersen, olezarsen).
Main Results:
- Traditional 2-year rodent bioassays are increasingly being replaced by shorter-term studies (e.g., 6-month Tg.rasH2 mouse study).
- Waivers or single-species studies are supported by existing data from related ASOs (e.g., inotersen, volanesorsen).
- The ICH S1B(R1) addendum provides a clear pathway for sponsors to reduce long-term studies based on comprehensive evidence.
Conclusions:
- The field of ASO carcinogenicity testing is shifting towards more efficient and data-driven strategies.
- Regulatory acceptance of reduced or waived long-term studies is increasing, supported by the totality of evidence.
- These evolving approaches align with the maturation of ASO technology and drug development.
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