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CACTI: Leveraging Copy Masking and Contextual Information to Improve Tabular Data Imputation
Aditya Gorla1,2, Ryan Wang3, Zhengtong Liu3
1Department of Computational Medicine, David Geffen School of Medicine, UCLA, Los Angeles, CA, USA.
Summary
We introduce CACTI, a novel approach for tabular data imputation that uses missingness patterns and feature descriptions. This method significantly improves data imputation accuracy across various missing data scenarios.
Area of Science:
- Machine Learning
- Data Science
- Artificial Intelligence
Background:
- Tabular data imputation is crucial for data analysis and machine learning.
- Existing methods often struggle with complex missingness patterns and lack of feature context.
- Effective imputation enhances downstream task performance and data integrity.
Purpose of the Study:
- To develop a novel masked autoencoding approach for tabular data imputation.
- To leverage both missingness patterns and contextual feature information for improved imputation.
- To outperform existing state-of-the-art imputation methods.
Main Methods:
- CACTI (Contextual Autoencoding for Tabular Data Imputation) employs masked autoencoding.
- A novel median truncated copy masking strategy is utilized during training.
- Semantic relationships from column names and descriptions are incorporated to model feature dependence.
Main Results:
- CACTI demonstrates superior performance across diverse datasets and missingness conditions.
- Achieved an average R-squared gain of 7.8% over the next best method.
- Outperformed methods by 13.4%, 6.1%, and 5.3% under missing not at random, at random, and completely at random scenarios, respectively.
Conclusions:
- Leveraging dataset-specific contextual information and missingness patterns enhances imputation performance.
- CACTI offers a robust and effective solution for tabular data imputation.
- The proposed method provides a valuable tool for data scientists and machine learning practitioners.
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