Related Experiment Video
Updated: Apr 11, 2026

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Proteome-wide Quantification of Labeling Homogeneity at the Single Molecule Level
Published on: April 19, 2019
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Label-Free Optical Differentiation of Single Diffusing Amino Acids at Picomolar Concentrations
Randall Goldsmith1, Julia Rasch2, Anna Clayborn2
1University of Wisconsin-Madison.
Research Square
|April 10, 2026
Summary
Researchers achieved label-free, single-amino acid detection using fiber-based Fabry-Pérot microcavities (FFPCs). This photonic technology can differentiate amino acids and peptides in solution, paving the way for protein sequencing.
Area of Science:
- Photonics
- Biotechnology
- Analytical Chemistry
Background:
- Label-free detection methods offer valuable molecular insights.
- High-finesse microcavities enhance light-matter interactions for sensitive measurements.
Purpose of the Study:
- To achieve label-free detection of single amino acids using fiber-based Fabry-Pérot microcavities (FFPCs).
- To demonstrate the differentiation capabilities of FFPCs for various amino acids and small peptides in solution.
- To assess the potential of FFPCs for protein sequencing applications.
Main Methods:
- Utilizing locked high-finesse fiber-based Fabry-Pérot microcavities (FFPCs) to amplify light-matter interactions.
- Varying FFPC sensitivity to differentiate molecules at the single-molecule level.
- Analyzing signal bursts in FFPC transmission for molecular detection events.
Main Results:
- Achieved label-free detection down to the single-amino acid level, including glycine.
- Successfully differentiated subsets of amino acids and small peptides (e.g., peptide vs. tryptophan, tryptophan vs. histidine).
- Demonstrated detection in solution at picomolar (pM) concentrations.
Conclusions:
- FFPCs enable highly sensitive and differentiating label-free detection of single amino acids and peptides.
- The observed neuron-like signal bursts correlate with optical and thermal parameter coupling.
- FFPCs represent a promising photonic technology for advancing single-molecule protein sequencing.

