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Published on: February 27, 2026
Bridging laboratory assays, genetics, and clinical phenotypes in antithrombin deficiency: Rethinking the diagnostic
Tamara Rojnik1, Robert Šket2, Barbara Slapnik2
1Department of Vascular Diseases, University Medical Centre Ljubljana, Ljubljana, Slovenia; Faculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia.
Commercial antithrombin (AT) activity assays show variable sensitivity for diagnosing antithrombin deficiency (ATD). Integrating genetic testing and ATD characterization improves diagnosis and risk stratification for thrombophilia.
Area of Science:
- Hematology
- Genetics
- Thrombosis Research
Background:
- Antithrombin deficiency (ATD) is a severe inherited thrombophilia.
- Current diagnosis relies on functional assays with uncertain sensitivity.
- Routine ATD characterization is limited by scarce clinical data.
Purpose of the Study:
- Evaluate diagnostic sensitivity of commercial antithrombin (AT) activity assays.
- Assess clinical differences among ATD types for improved diagnostic approaches.
- Refine the diagnostic strategy for inherited thrombophilia.
Main Methods:
- Analyzed 88 patients with decreased AT activity and 124 with unprovoked venous thromboembolism.
- Measured AT activity using six commercial assays.
- Performed genetic analysis of SERPINC1 via Sanger sequencing, MLPA, and whole-genome sequencing.
Main Results:
- Detected 15 SERPINC1 variants, including two novel ones; AT Padua I was most prevalent (49%).
- Assay sensitivity varied significantly; two assays showed high sensitivity (93%), others poor (46%).
- ATD type characterization improved risk stratification, linking Type I to venous thrombosis and Type IIHBS to arterial thrombosis.
Conclusions:
- Assay sensitivity for ATD diagnosis is highly variable; few assays are suitable first-line tests.
- Integrate genetic testing for undetectable variants and ATD characterization into diagnostic algorithms.
- Recommend screening young patients with arterial thrombosis for ATD.
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