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Development of In Vitro Potency Assays for Gene Therapy Products Targeting cGMP-Related Retinopathies
Marina Pavlou1, Stylianos Michalakis2
1Department of Neurobiology and Biophysics, University of Washington, Seattle, WA, USA.
Methods in Molecular Biology (Clifton, N.J.)
|April 22, 2026
Summary
A new cell-based assay was developed to test adeno-associated virus (AAV) gene therapies for inherited retinal diseases. This in vitro system efficiently measures AAV vector potency and biological function, aiding in the development of treatments for achromatopsia.
Area of Science:
- Biotechnology
- Gene Therapy
- Ophthalmology
Background:
- Adeno-associated virus (AAV) vectors are crucial for developing gene therapies for inherited retinal diseases.
- Current preclinical testing relies on animal models, which are not suitable for manufacturing batch release or later-stage validation.
- There is a need for rapid, reliable in vitro models to assess therapeutic vector function.
Purpose of the Study:
- To develop and validate a novel cell-based system for evaluating adeno-associated virus (AAV) vectors.
- To assess the potency and biological function of AAV vectors designed for treating CNGA3-linked achromatopsia.
- To establish a reliable in vitro method for gene therapy vector assessment.
Main Methods:
- Developed an immortalized cell line expressing rhodopsin guanylyl cyclase (RhGC) and a genetically encoded calcium indicator (GECI) under tetracycline-inducible control.
- Utilized the cell-based system to evaluate AAV vectors delivering a functional CNGA3 gene.
- Employed a fluorometric assay based on the interdependent activity of expressed proteins to measure ion channel function.
Main Results:
- Successfully confirmed and quantified the function of the ion channel encoded by AAV/CNGA3.
- Demonstrated the ability to differentiate between the potencies of various AAV vector preparations.
- Showed the adaptability of the system for assessing other AAV-borne functions, such as phosphodiesterase activity.
Conclusions:
- The developed cell-based system provides a rapid and reliable in vitro method for evaluating AAV vector potency and biological function.
- This assay system is valuable for the preclinical development and quality control of gene therapies for inherited retinal diseases.
- The approach is versatile and can be adapted for assessing a range of AAV-mediated gene therapies.

