Related Experiment Video
Updated: Apr 29, 2026

Amplicon Sequencing using the Long-Read Sequencing Technologies
Published on: August 29, 2025
Mycobacteria Amplicon Sequencing Tool: automated resistance prediction and lineage classification for Mycobacterium
Idowu B Olawoye1, Maxim Fedorov1, Robert A Petit2
1Department of Microbiology & Immunology, University of Western Ontario, London, Ontario, Canada.
Abstract:
The Mycobacteria Amplicon Sequencing Tool (https://github.com/guthrielab/MAST) is a modular Nextflow pipeline for antimicrobial resistance prediction and lineage classification of Mycobacterium tuberculosis from amplicon or whole-genome sequencing data sets. The workflow automates read processing, variant calling, and annotation to produce standardized, human-readable reports in DOCX and TSV format.
Related Concept Videos
Modern Molecular Taxonomy
Applications of Molecular Taxonomy
Clinical Significance of Antibiotic Resistance
Automated Microbial Diagnostics

