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Related Concept Videos

The Replisome03:01

The Replisome

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DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with...
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Folding and Characterization of a Bio-responsive Robot from DNA Origami
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Assembly-Energetics-Control (AEC) Design Framework for Rotary DNA Nanomachines.

Xue-Yan Wang1, Yicheng Heng1, Julian A Tanner1,2,3,4

  • 1School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, P. R. China.

Chembiochem : a European Journal of Chemical Biology
|April 28, 2026
PubMed
Summary
This summary is machine-generated.

This study introduces a new framework for classifying rotary DNA nanomachines, aiding researchers in designing scalable and autonomous molecular machines. The Assembly-Energetics-Control framework simplifies complex designs for DNA-based motors.

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Area of Science:

  • Nanotechnology
  • Molecular Engineering
  • Synthetic Biology

Background:

  • Rotary DNA nanomachines are programmable molecular devices mimicking biological motors for energy conversion and mechanical force.
  • Increasing structural and actuation diversity in DNA nanomachines leads to conceptual complexity.
  • A systematic classification is needed to guide future development.

Purpose of the Study:

  • To introduce a novel engineering-inspired design framework for rotary DNA nanomachines.
  • To provide a systematic approach for classifying and understanding these complex systems.
  • To guide researchers in developing advanced DNA nanomachines with enhanced capabilities.

Main Methods:

  • Development of the Assembly-Energetics-Control (AEC) design framework.
  • Classification of nanomachines along three independent axes: Assembly (Modular/Global), Energetics (Active/Passive), and Control (Autonomous/Nonautonomous).
  • Mapping of existing rotary DNA nanomachine examples onto the AEC framework.

Main Results:

  • The AEC framework effectively categorizes diverse rotary DNA nanomachines.
  • Identification of key interdependencies between assembly, energetics, and control strategies.
  • Discovery of underexplored design categories within the AEC space.

Conclusions:

  • The AEC framework offers a clear and scalable method for designing rotary DNA nanomachines.
  • It facilitates the development of autonomous and biocompatible DNA-based molecular motors.
  • This classification system aids in navigating the complexity and advancing the field of DNA nanotechnology.