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Published on: November 30, 2022
Kidney Segmentation of Histopathological Images with Edge-Aware U-Net to Support Medical Diagnosis and Treatment
Esraa Hassan1, Amira Samy Talaat2, Shaimaa M Hassan3,4
1Department of Machine Learning and Information Retrieval, Faculty of Artificial Intelligence, Kafrelsheikh University, Kafrelsheikh 33516, Egypt.
Abstract:
Accurate segmentation of renal anatomical structures is essential for informed clinical decision-making in nephropathology, supporting precise diagnosis, treatment planning, and longitudinal monitoring of kidney diseases. In this work, we propose an Edge-Aware U-Net architecture with Boundary-Sensitive Optimization, specifically designed to address the challenges of fine anatomical boundary delineation in histopathological images. Comprehensive benchmarking against state-of-the-art models including U-Net, Attention U-Net, and ResUNet demonstrates robust quantitative performance alongside strong potential for clinical deployment. The proposed model achieves superior boundary preservation, reflected by a high structural similarity index (SSIM: 0.9473), while maintaining computational efficiency with an average inference time of 52 ms per image. It further outperforms existing methods across key image quality metrics, including PSNR (17.269 dB), MAE (0.0266), and RMSE (0.0321). Clinical validation indicates statistically significant improvements in glomerular detection (p < 0.01) and effective tubulointerstitial differentiation (F1-score: 0.891), with consistent performance observed across multiple staining protocols.
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Imaging Studies I: Kidney, Ureter, and Bladder Studies
Internal Anatomy of the Kidney
Anatomical Position and Dimensions
The kidneys are retroperitoneal organs positioned against the posterior abdominal wall on either side of the spine, roughly between the twelfth thoracic and third lumbar vertebrae. Each kidney is typically 10-12 cm long, 5-6 cm wide, and 3-4 cm thick, weighing about 150 grams.
Renal Cortex
The outermost region of the kidney is the...

