Design, synthesis, and biological evaluation of novel probe-quality EGFR degraders targeting wild-type and Del19

Xiaomeng Gong1, Mingyue Zhang1, Jingli Min2

  • 1Affiliated Yongkang First People's Hospital and School of Pharmaceutical Sciences, Hangzhou Medical College, Hangzhou, China; School of Pharmacy, Hangzhou Medical College, Hangzhou 310059, China.

Insights

This study compares targeted degradation technologies for epidermal growth factor receptor (EGFR) in cancer. VHL-based PROTACs effectively degrade wild-type and mutant EGFR, guiding future degrader development.

Area of Science:

  • Oncology
  • Molecular Biology
  • Drug Discovery

Background:

  • Epidermal growth factor receptor (EGFR) is a critical therapeutic target in solid tumors, including non-small cell lung cancer (NSCLC).
  • Mutations and overexpression of EGFR drive oncogenic signaling, necessitating novel therapeutic strategies.
  • Targeted protein degradation offers a promising approach to eliminate disease-driving proteins.

Purpose of the Study:

  • To comparatively analyze various targeted chimeric degradation technologies against allosteric sites of EGFR.
  • To provide guidance for the development of novel allosteric EGFR degraders.
  • To evaluate the efficacy of different degradation mechanisms against wild-type and mutant EGFR forms.

Main Methods:

  • Comparative analysis of VHL-based PROTACs, CRBN-based PROTACs, AUTAC, and HyT-type compounds targeting EGFR.
  • Assessment of degradation activity against EGFR wild-type (EGFRWT), EGFRDel19, and EGFRL858R/T790M mutants.
  • Evaluation of cell proliferation inhibition and physicochemical properties (cLogP, PSA) of tested compounds.

Main Results:

  • VHL-based PROTAC compound III-4 showed optimal degradation of EGFRWT (76%) and EGFRDel19 (72%) via the ubiquitin-proteasome pathway.
  • CRBN-based PROTACs II-3 and II-5 effectively degraded EGFRL858R/T790M (approx. 60%) and inhibited H1975 cell proliferation.
  • PROTAC compounds exhibited favorable physicochemical properties (cLogP, PSA) compared to other technologies.

Conclusions:

  • VHL-based PROTACs are highly effective for wild-type and common EGFR mutants.
  • CRBN-based PROTACs demonstrate potential for targeting acquired resistance mutations like EGFRL858R/T790M.
  • This study provides valuable insights for designing next-generation allosteric EGFR degraders.