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DNA Nanotubes as a Versatile Tool to Study Semiflexible Polymers
Published on: October 25, 2017
Free-energy landscape and morphological transitions of semiflexible polymers
1Solid State and Structural Chemistry Unit, Indian Institute of Science, Bengaluru 560012, India.
Abstract:
Semiflexible polymers in poor solvents exhibit a wide variety of collapsed morphologies, including globules, toroids, and rodlike bundles, arising from the competition between attractive interactions and chain stiffness. Computer simulations and experiments on stiff and conjugated polymers have revealed complex morphological crossovers, yet a unified theoretical description remains incomplete. Here, we develop a coarse-grained, field-theoretic free-energy framework for linear polymers with variable stiffness that captures these morphologies and their transitions within a common description. The theory is built on three key ingredients: a density field describing monomer attraction and excluded-volume effects, a nematic order parameter accounting for orientational ordering in dense regions, and the bending rigidity of a worm-like chain. Using simple variational ansatzes for competing morphologies, we derive analytic expressions for their free energies and identify the boundaries separating coil, globule, toroidal, and rodlike conformational regimes as functions of the reduced attraction strength and the effective persistence length. The resulting phase-diagram topology provides a transparent free-energy-based framework for interpreting morphology diagrams observed in simulations and experiments on semiflexible polymers in poor solvents. We consider the possibility of the existence of a triple point involving globules, rods, and toroids.
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