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Related Experiment Video

Updated: May 14, 2026

Brain Infarct Segmentation and Registration on MRI or CT for Lesion-symptom Mapping
10:25

Brain Infarct Segmentation and Registration on MRI or CT for Lesion-symptom Mapping

Published on: September 25, 2019

Effect of vascular lesion preprocessing on Brain Intensity AbNormality Classification Algorithm (BIANCA) white matter

Uchralt Temuulen1, Ralf Mekle1, Ivana Galinovic1

  • 1Center for Stroke Research Berlin, Charité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany.

Neuroimage. Clinical
|May 12, 2026
PubMed
Summary
This summary is machine-generated.

BIANCA with LOCATE shows moderate white matter hyperintensity segmentation in stroke patients. Lesion removal is recommended for improved accuracy, as large lesions impact segmentation performance.

Keywords:
Automated segmentationBIANCACerebral small vessel diseaseFLAIRLOCATEStrokeWhite matterhyperintensities

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Area of Science:

  • Neuroimaging
  • Medical image analysis
  • Cerebrovascular disease research

Background:

  • White matter hyperintensity (WMH) segmentation in stroke is challenging due to overlapping lesion characteristics.
  • Systematic evaluation of preprocessing impacts on WMH segmentation in multi-scanner cerebrovascular studies is lacking.

Purpose of the Study:

  • To compare thresholding methods and lesion-handling strategies for WMH segmentation using BIANCA.
  • To assess the impact of preprocessing decisions on segmentation accuracy in stroke populations.

Main Methods:

  • Compared fixed vs. LOCATE adaptive thresholding and lesion removal, zero-intensity replacement, or inpainting.
  • Utilized the BeLOVE and WMH Segmentation Challenge datasets for optimization and validation.
  • Employed 5-fold cross-validation for threshold optimization and assessed segmentation accuracy and volume agreement.

Main Results:

  • BIANCA with LOCATE achieved moderate WMH segmentation (Dice 0.567) and high lesion-level detection (F1 > 0.85).
  • Preprocessing effects on segmentation accuracy were statistically detectable but negligible across conditions.
  • Stroke lesion volume was the primary predictor of volume differences, scaling with size but remaining negligible.

Conclusions:

  • BIANCA with LOCATE offers a balanced sensitivity-precision trade-off for WMH segmentation in multi-scanner cerebrovascular cohorts.
  • Group-level preprocessing effects were minimal, but large lesions can distort BIANCA's classification.
  • Lesion removal is a justified preprocessing step to mitigate distortions caused by large lesions.