Related Experiment Video
Updated: May 24, 2026

04:25
Manual Segmentation of the Human Choroid Plexus Using Brain MRI
Published on: December 15, 2023
Physics-informed DynUNet for brain metastasis segmentation.
Murat Güzel1, Ömer Kaan Baykan2
1Department of Computer Technology, Mucur Vocational School, Kırşehir Ahi Evran University, Kırşehir, Türkiye.
Computer Methods and Programs in Biomedicine
|May 22, 2026
Summary
Physics-informed deep learning improves brain metastasis segmentation, especially for small lesions. Optimal configurations vary by clinical application, offering context-specific deployment for better neuro-oncology outcomes.
Area of Science:
- Neuro-oncology
- Artificial Intelligence
- Medical Imaging
Background:
- Detecting and segmenting small brain metastases is challenging for standard deep learning.
- Existing models lack biological information on metastasis growth, limiting performance on low-volume lesions.
Purpose of the Study:
- To investigate if integrating physics-informed (PI) tumor growth models into segmentation architectures can overcome size-dependent limitations in brain metastasis detection.
- To evaluate the effectiveness of PI-DynUNet in segmenting brain metastases of varying sizes and characteristics.
Main Methods:
- Developed PI-DynUNet by integrating a physics-based growth model with DynUNet.
- Trained and compared PI-DynUNet against U-Net variants on the BraTS-METS 2023 dataset using controlled settings.
- Evaluated performance across six lesion-size categories and assessed clinical context-specific performance using scenario-weighted Dice coefficients.
Main Results:
- PI-DynUNet demonstrated improved segmentation across all BraTS regions, with notable gains in non-enhancing tumor core (NETC) Dice (+5.3%).
- Optimal regularization weights (λ) were found to be tissue and lesion-size dependent.
- Context-dependent optimal models were identified, with PI-DynUNet (λ=0.01) excelling in enhancing-weighted scenarios and λ=1.0 showing superior balanced accuracy.
Conclusions:
- Physics-informed deep learning offers modest but significant improvements in brain metastasis segmentation.
- External validation confirmed the outperformance of PI-DynUNet over baseline DynUNet, with substantial gains in tumor-core Dice.
- Optimal PI-DynUNet configuration is application-specific, guiding context-aware deployment for neuro-oncology applications.
