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Updated: May 24, 2026

Automated Segmentation of Cortical Grey Matter from T1-Weighted MRI Images
Published on: January 7, 2019
Comparison of Loss Functions for Fibroglandular Tissue Segmentation in MRI
Alexia Rizoudis1, Ramona Wudy2, Carl Mathis Wild3
1IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany.
Abstract:
Due to anatomical variability and imaging heterogeneity, the choice of loss function for breast, fibroglandular tissue (FGT), and implant segmentation in magnetic resonance imaging (MRI) is a challenging task. This study compares three loss function strategies for image segmentation: a baseline model using the standard Dice + cross-entropy loss, the Skeleton Recall Loss (SRL) targeting fine structural details, and a novel Volume-Aware Loss (VAL) penalizing implausibly small or false-positive implant predictions. A total of 136 pre-contrast T1-weighted breast MRI volumes were used for 5-fold cross-validation. The baseline achieved the highest overall performance (mean DSC: 0.921 breast, 0.712 FGT, 0.933 implant), while SRL and VAL were comparable to the baseline within the statistical variance of the dataset. Thus, we deduced that the standard Dice + cross-entropy loss remains the gold-standard for heterogeneous breast MRI segmentation.

