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Updated: May 26, 2026

Preparation of Enantiopure Non-Activated Aziridines and Synthesis of Biemamide B, D, and epiallo-Isomuscarine
Published on: June 13, 2022
Physicochemical Properties of α-Fluoroalkyl-Substituted Cycloalkylamines and Amino Acids
Kostiantyn P Melnykov1,2, Oleksandr S Liashuk2,3, Andrii Koblianskyi1,2
1Enamine Ltd., Kyiv, Ukraine.
Abstract:
A systematic matched molecular pair analysis of α-fluoroalkyl-substituted alicyclic amines (C3-C6 cycloalkanes and tetrahydropyran) and their benzamide models by benchmarking them against β- and γ-substituted analogs is reported. Experimentally obtained acidity and lipophilicity values (pKa and LogP) revealed an exceptionally strong and predictable impact of α-fluoroalkyllation on the acid-base properties of the amine moiety with an approximately additive contribution of 1.6 ± 0.1 pKa units per fluorine atom. Lipophilicity trends were more nuanced, yet α-substitution produces distinctive ΔLogP patterns consistent with competing inductive and local polarization effects near the amide fragment. Mapping the obtained dataset in LogP-pKa space highlights the cluster-type localization of the various fluoroalkylated patterns, enabling property tuning via isosteric substitutions. Finally, multigram-scale access to diastereopure α-CF3 cycloalkyl amino acids was proposed along with quantification of their ionization profiles, supporting application of these scaffolds as versatile fluorinated building blocks for drug discovery.
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